| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3134 |
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| Symbol | |
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| ID | 3910935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3581229 |
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| End bp | 3582812 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885036 |
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| Product | hypothetical protein |
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| Protein accession | YP_486741 |
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| Protein GI | 86750245 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.673748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.335659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCG CGGCACCGGC GGCGTCCGCC ATGCAATCGA TGACGGGAGC AGACCGGCTT
TGCGATGCGC TACTGGCGCA CGAGGTCGAT GTCTGCTTCG CCAATCCTGG CACGTCGGAG
ATGCATTTCG TGGCGGCGCT CGATCGCCAG CCGCGGATGC GGTGCATCCT GGGTCTGTTC
GAGGGCGTCG TCACCGGCGC TGCGGACGGT TACGCCCGGA TGCGCGACCG GCCGGCCGCG
ACGCTGCTGC ATCTCGGCCC GGGCCTCGCC AACGGCCTAG CCAACATCCA CAACGCCCGC
CGCGCGCATT CGCCGATGAT CAACGTCGTC GGCGATCACG CGGTCGAGCA TCTGCCGCTG
GACTCGCCGC TGACCAGCGA CATCGACTCG CTGGCGCGCC CGATGTCGCG CTGGGTCAAA
CGGATCGGCG ATCCGACGCG GATCGATCTC GACGTGGCGG AGGCCTGGTC GCAGAGCATG
GCGCCCGGGA TTTCCACCCT GATCCTGCCG GCGGACATGG CCTGGAACGA GCATGTCTAT
CGCGCGCCGC CGGCGCGGGG CAGGCGGCTG CCGCAAGCGC CGCTTCAGCA GGAGACGGTG
GCGCGGATCG GCGCCGCGAT CCGCACCAAG CGGCGTGTCG TGCTGCTGCT GACCGGCGCC
GCCTTGCGTG AGCAGGCACT GTCGATTGCG GACGGCATCC GCCGCAGCGC CGGTGTCGAG
ATCTACGCGC AGGGCGCCAA CGGCCGGATC GAACGTGGCC GCGGCCGCGC GCCGATCGCG
AAGCTGGCGA TGACCCACGA GATCGGCGGC CGGATGCTGC AGGACGTCGA CATGGTGGTG
CTGATCGGCG CCAAGGAGCC GGTGTCGTTC TTCGCCTATC CGAACAGGCC GGGAAGGCTG
GCGCCGGCGA ATTGCGAGAT CGTCCGGCTG GCGGGGCCGG ATCAGGATTT GGTACAGGCG
CTCGAATGGC TGGCCGACGA GGTCGATGCC CCGCGCGCGC CGGTCGCGGT CGCGCCGCGC
GCCGCTGCGG CGCCGGTCGC CAGCGGGGCG TTGACCGTCG ATATGGTGAA CCGCCTCGTC
GCCGCGCGGC TGCCCGAGCA AGCGATCGTC TGCGACGAGG CACTGACCTC GTCGGGCTTC
TTCGACCTGT CTTACGACGC CCCGCCGCAC GACTATCTGC AGATCACCGG TGGCGCGATC
GGGATCGGCA TTCCGATGGC CGCGGGCGCC GCGGTCGCGT GTCCCGACCG CAAGGTGATC
AACCTGCAGG CCGACGGCAG CGGCATGTAC ACGGTGCAGG GTCTGTGGAC CCACGCGCGC
GAGAATCTCG ACGTTCTCAC CATCGTATTT TCGAACCGCT CCTACGCCAC GCTGTGGGGC
GAGATGAGCA AGGTCGGTGC GCAGACGCCG GGACGCAATG CGCAGCGCAT GCTGCAGCTC
GATCAGCCCG AGCTCGACTG GACCAAGCTG GCTGCGGGGC TCGGCGTCGA ATCCCGCCGA
GTCACGACGG CGTCGGAGTT CTCGCGCGCG TTCGATGCCG CGCTCGGCCG GCGTGGTCCT
GCCGTGATCG AGGCAATGGT GTGA
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| Protein sequence | MAVAAPAASA MQSMTGADRL CDALLAHEVD VCFANPGTSE MHFVAALDRQ PRMRCILGLF
EGVVTGAADG YARMRDRPAA TLLHLGPGLA NGLANIHNAR RAHSPMINVV GDHAVEHLPL
DSPLTSDIDS LARPMSRWVK RIGDPTRIDL DVAEAWSQSM APGISTLILP ADMAWNEHVY
RAPPARGRRL PQAPLQQETV ARIGAAIRTK RRVVLLLTGA ALREQALSIA DGIRRSAGVE
IYAQGANGRI ERGRGRAPIA KLAMTHEIGG RMLQDVDMVV LIGAKEPVSF FAYPNRPGRL
APANCEIVRL AGPDQDLVQA LEWLADEVDA PRAPVAVAPR AAAAPVASGA LTVDMVNRLV
AARLPEQAIV CDEALTSSGF FDLSYDAPPH DYLQITGGAI GIGIPMAAGA AVACPDRKVI
NLQADGSGMY TVQGLWTHAR ENLDVLTIVF SNRSYATLWG EMSKVGAQTP GRNAQRMLQL
DQPELDWTKL AAGLGVESRR VTTASEFSRA FDAALGRRGP AVIEAMV
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