| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3129 |
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| Symbol | |
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| ID | 3910930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3574914 |
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| End bp | 3575669 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637885031 |
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| Product | secretin/TonB, short-like protein |
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| Protein accession | YP_486736 |
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| Protein GI | 86750240 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.828632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.319534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTTGTCA TGCTTCTGGG CACTGAATCA GAACTGCCGA TATTTCCTTG GCCGCGTCAG
GCGTCGTGGC TGTGGGCTGC AGTCCTATCG GCGGCATTCG CGATGGCTGG CGCGGTTGCG
GCAGAAAAAG CGGGGGAACG GGAAAACGCC GGTTCTTTCT CGTTCGACAT CGCCCCGCAG
CCTCTGGAGG CGGCGCTCGA TGTCTTCAGC TCGACCAGCA ATGTGCAGGT TCTATATGAG
ACGTCGCTGA CGTCGGGGCG TCGTTCAGCG AAAGTCCAAG GTGTCTTCAC GCCCGAGGCT
GCGTTGCAGG CGATGCTTGC CGGATCCGGC TTGACCGCGT GGCATACCAC CCAGGACTCA
TTTTCGCTGG TTCCGCGTCA GGACGTAGCC TCGTTGGGCG ACAACGTTCC AGCTCGTTCC
CCGCCGGAGA TCGCCAGATA CGGGCGTTTC TTGGGAGTCG TGCAGGCGGG CCTCCTCGAC
ACGCTCTGCC GAAACGCGCA GACCCGTCCG GGGCAGTACA AGGTTGCCCT CAGATTCACG
GTCGGATCTT CCGGTGAGGT TTTGTTGACC TCTTTGGTGA ATTCGTCCGG CGACCGCGAT
CGGGATGCGC AGATCATCGC CGCGGTGGGG CGGCTGACGG TGAGCGAAGC GCCGCCTTCG
CAACTACCAC AACCTATTAC CATGGTGATC GCGCCGCGCC CCCCCGATGT GACCGGCGAT
TGTGCTTCGG CTGATCGAAT GCGGGCCAAT CAATAA
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| Protein sequence | MVVMLLGTES ELPIFPWPRQ ASWLWAAVLS AAFAMAGAVA AEKAGERENA GSFSFDIAPQ
PLEAALDVFS STSNVQVLYE TSLTSGRRSA KVQGVFTPEA ALQAMLAGSG LTAWHTTQDS
FSLVPRQDVA SLGDNVPARS PPEIARYGRF LGVVQAGLLD TLCRNAQTRP GQYKVALRFT
VGSSGEVLLT SLVNSSGDRD RDAQIIAAVG RLTVSEAPPS QLPQPITMVI APRPPDVTGD
CASADRMRAN Q
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