Gene RPB_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3106 
Symbol 
ID3910907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3539132 
End bp3540049 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID637885010 
Productesterase/lipase/thioesterase 
Protein accessionYP_486715 
Protein GI86750219 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.852279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACG TAGCGCCTCC GGACATCCCG GCTGAACTCC GCGCGCTGAT GGCGGAGATC 
GGCCCGAAAT GGGCGACCAA CACCAAAGGC CACATCCAGC TGATGATCGA CGAGTTCAGC
GAGTTGCTGA AGCACTCGCC GAAGCAAGGC GTCGACGTCG AGCCCAACAT CACCTATGGC
CCGCACGAGC GCCAGGCCTT CGACGTCTAT CGGCCGCATT CACCATCCCA GACGCCGCGG
CCGGGGCTGA TCTTCGTTCA CGGCGGCGCG TTCACCGAAG GACGACGCGA TCGCAGCAGC
GAAATCTACG CCAACGTCCT GTATTACTTC GCGCGGCACG GCATCGTCGG CATCAATGCC
GGCTACCGCC TGGCGCCCGA GGCGCGCTAT CCCGGGGCGA CGCGCGACAT CGCCAAAATC
GTGGCCTGGA TGCGCGCCAA CGCAACGGAT CTTGGAGTCG ACCCGGAACG GATTTTCCTG
ATGGGTCATT CGGCCGGCGG GGCACATGTC GGCAGCTACG CGTTCGACCG CCGGCACCAG
GCCGATGGCG GTCACGGGCT TGCCGGCGTG CTGATCATCA GCGGCCGCGT ACGCGCCGAT
AGCCACGCCC ACAACCCCAA CGCGCTCCGA GTCGCCGAAT ATTACGGGAG CGATGCCGCG
GTCCACGAGG ACGTCTCGCC GGTCAACCAC GTCGACGCAA CGAGCCCGCC GACCTTCATC
GCCTGCGCGG AATTCGAAAA CCCGCTGATC GACGTGTATT GCTTCGAGCT GGCCTATCGG
CTCGCCGCGG CGAAGCGAAA GGCGCCGCCC TTCATGTGGC TCAAGGGCCA CAACCACACC
TCGATCATCG GCCAGTTCAA CACCGCCGAA GACGCGCTCG GCCGCGCGTG CCTCGATTTC
ATCCGGTCTA CGAGCTGA
 
Protein sequence
MQDVAPPDIP AELRALMAEI GPKWATNTKG HIQLMIDEFS ELLKHSPKQG VDVEPNITYG 
PHERQAFDVY RPHSPSQTPR PGLIFVHGGA FTEGRRDRSS EIYANVLYYF ARHGIVGINA
GYRLAPEARY PGATRDIAKI VAWMRANATD LGVDPERIFL MGHSAGGAHV GSYAFDRRHQ
ADGGHGLAGV LIISGRVRAD SHAHNPNALR VAEYYGSDAA VHEDVSPVNH VDATSPPTFI
ACAEFENPLI DVYCFELAYR LAAAKRKAPP FMWLKGHNHT SIIGQFNTAE DALGRACLDF
IRSTS