| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3105 |
|---|
| Symbol | |
|---|
| ID | 3910906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3538166 |
|---|
| End bp | 3539119 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637885009 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_486714 |
|---|
| Protein GI | 86750218 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0508507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.867387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACG AGACGCCCGT GATCGCGATC GAGGAACATT ATTGGGACCC GGAGATGGTC
GCTCGTTTTC CCGCCGGGGA GAACGCTTCG CCTTTCTCGA CGCTGCTGAC AGAACTCGGC
GACGTCCGGC TGCGCGCGAT GGACGAGGCC GGGATCGACG TGCAGGTGCT GTCGCACGGC
GCACCCGCCG CGCAGAAATT GCCGCCGGAT GTCGCTCCCG AGCTGACGCG GCGCGTCAAC
GATCGGCTTG CCGAAGCCTG CGCGCGTTTT CCAAACCGGT TCGCCGCCTT TGCCGCCCTC
CCGACGCCGG CGCCCGAAGC CGCGGCGCGC GAGTTGGAAC GCTGCGTCCG CGACCTCGGC
TTCAAGGGCG CGATGATTCA CGGCCTGACC AACGGCCTAT TCATCGACGA CAAGCGATTC
TGGCCGATAT TCGAGGTCGC CGAAAAGCTC GACGTGCCGA TTTATCTGCA TCCGTCGGTC
CCCCACGCGG ACGTCACGCG ATACTATTAC GACGACTACG CGCGCGAATT TCCGACCGTG
ATCCGGCCGG CCTGGGGCTT CACCGTCGAA ACCGCGACCC AGGCGATCCG GCTGATCCTG
AGCCGCGCGC TGGAAAGCTA TCCGCGGCTG CAGATCATCC TCGGCCATCT CGGCGAGACC
CTGCCCTTCC TGCTGTGGCG GATCAACCAG GCCCTGGCGC GGCCGGGTCA GACGCCACTC
GACTTCCGCA AGCAATTTTG CGATCACTTC CACGTCACGA CCAGCGGCTT CTTCTCCACG
CCGGCGCTGA TCTGCACGAT GCTGGAGCTC GGTATCGATC GCATCATGTT CGCGGTCGAC
TACCCCTATG TGGTGAACCG CGACGGCACC GACTGGGTCC AGCAGTTGCA GATCTCACCG
GACGACAAAC GCAAGCTGGT CGGCGGCAAC GCCCGCCGTC TGCTCAAGCT CTAG
|
|---|
| Protein sequence | MQNETPVIAI EEHYWDPEMV ARFPAGENAS PFSTLLTELG DVRLRAMDEA GIDVQVLSHG
APAAQKLPPD VAPELTRRVN DRLAEACARF PNRFAAFAAL PTPAPEAAAR ELERCVRDLG
FKGAMIHGLT NGLFIDDKRF WPIFEVAEKL DVPIYLHPSV PHADVTRYYY DDYAREFPTV
IRPAWGFTVE TATQAIRLIL SRALESYPRL QIILGHLGET LPFLLWRINQ ALARPGQTPL
DFRKQFCDHF HVTTSGFFST PALICTMLEL GIDRIMFAVD YPYVVNRDGT DWVQQLQISP
DDKRKLVGGN ARRLLKL
|
|---|
| |