| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3080 |
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| Symbol | |
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| ID | 3910881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3511375 |
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| End bp | 3512226 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637884985 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_486690 |
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| Protein GI | 86750194 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.35224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATC GATCCGCTTT TGCCGAGTTT GCCTTGCGCT TCGCCCGTAA CCGCGGCGCG
CTGCTCGGAA TTATCATCAT TGTCGTCGTG TTGGGACTCG CTCTCGCCGC ACCCTGGCTG
ATCGAACAGA ATCCGCTGCG CATCGTCTCG CGGCCGGAGG TCTGGCCGTT CACCAACCCG
CGCTACCCGC TCGGCACCGA CTCGATCGGC CGGAACATTC TGGCGATGAT AGCCTACGGT
GCTCGAACGA CGCTGATGAT CGGCATCGTC GCGGCGCTGA CTGCGACCGC CATCGGCGTC
GTGATCGGTG CCGCCGCGGC ATGGTTCGGT GGCTGGATTG ACGAGGTCCT GACCCGGATC
ACGGAGCTGT TTCAGACGGT CCCGAACATC CTGTTGATCA TGACGGTGGT GGCGATCCTG
GGCCAGACCA TCGACAACAT CACGATGGCG ATCGGCGTCA CGATGTGGCC GGGCATCGCC
CGGCTGACGC GAGCCGAATT CCTTACGCTG AAGAACCGTG AATTCGTGCT GGCGTGCCGT
TCGATGGGCA TGAGCAACAT CAGGATCATG GCGGGCGAAA TCCTGCCCAA CGCGATTCCG
CCGGTGATCG TGCTCGCCTC GGTGATCATC GGCAGCTCGA TCCTGTTCGA GAGCGCGATC
TCGTTTCTCG GTCTCGGCGA TCCCAATGTC GCGAGCTGGG GCGCGCTGAT CGGCGACGGC
CGCACGTTGA TCCGCCGCTC CTGGTACATC TGCGCGATCC CCGGCGTTGC GATCATGCTG
ACGGTGCTGG CGATGAACCT GATCGGCGAT GGGCTGAATG ACGCGCTCAA TCCCAAGCTG
AGGGACCGCT GA
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| Protein sequence | MKDRSAFAEF ALRFARNRGA LLGIIIIVVV LGLALAAPWL IEQNPLRIVS RPEVWPFTNP
RYPLGTDSIG RNILAMIAYG ARTTLMIGIV AALTATAIGV VIGAAAAWFG GWIDEVLTRI
TELFQTVPNI LLIMTVVAIL GQTIDNITMA IGVTMWPGIA RLTRAEFLTL KNREFVLACR
SMGMSNIRIM AGEILPNAIP PVIVLASVII GSSILFESAI SFLGLGDPNV ASWGALIGDG
RTLIRRSWYI CAIPGVAIML TVLAMNLIGD GLNDALNPKL RDR
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