| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3013 |
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| Symbol | |
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| ID | 3910812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3436452 |
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| End bp | 3437879 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884919 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_486626 |
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| Protein GI | 86750130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0874514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.639267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATG TGATGATTGA AACTCTGCCC GGAGGATTGC GCCGGAAGGC CTGCGCGCAG
GCGTCGCGGC TGGTGGCGAT CCTGAGCGCC GCCGCGCTGG CGCTCGCCCC GGTTCCCGGC
CTCGCGCAGG CGCCGCAGCC GAAGGGGCCG CCGCTGCTGC GCGACACCGA GATCGAGAAT
CTGCTGCGCG ACTATACGCG ACCGATCCTG CGCGTCGCCG GCCTCGAAAA GCAGAACATC
CAGATCGCCA TCATCAACGA TCCGAATTTC AACGCCTTCG TCGCCGACGG CCGCCGCATC
TTCGTCAATT ACGGTGCGCT GATGCAGTCG CAAACCCCGA ACCAGTTGAT CGGCGTGCTG
GCGCACGAGA CCGGCCATCT CGCCGGCGGC CATCTGTCCA AGCTCCGCAC CCAGCTCGCG
CAAGCACAGA CGCAGATGAT CGTGGCGATG CTGCTCGGCG TCGGCGCGAT GGTGGCGGGC
TCCAAGGCCG GCCCGAACAG CGGCGCCGGC AATATCGGTG CGGCCGCGAT CTCGGCGCCG
CAGGAATTGA TCCGGCGCAA TCTGCTGTCC TATCAGCGGC AGCAGGAAGA GAACGCCGAC
AAGGCCGCAG TGAAATTTCT CGACGCCACC GGCCAGTCGG CGAAGGGCAT GTACGAAACG
TTCCGTCGTT TCACCGACGA GAGCCTGTTC GCCGCGCGCG GCGCCGATCC TTATGCGCAG
TCGCATCCGA TGCCGGCCGA ACGCGTCCGC GCGCTGGAAG AGCTGGCGCG CTCCAGCCCG
AATTGGGACA AGAAGGACGA CGCCGCACTG CAGCTCCGCC ACGACATGAT GCGTGCCAAG
ACGTCCGGCT TCATGGAGCG TCCCGACACC GTTTACCGGC GCTATCCGTC GTCGAACACC
AGCCTGCCCG CGCGCTACGC CCGCGCCATC TCGACCTATC TGCACGGCGA TCCGCGCTCG
GCGCTGGCCC AGATCGACGG CCTGATTCAG GCCGAGCCGA ACAATCCCTA TTTCTACGAG
TTGCGCGGCC AGGCGCTGCT CGAGGGCGGT CGGCCGCAGG AAGCGATCGC GCCACTGCGC
AAGGCGTTGT CGCTCAGCCG CAGCGCCCCG CTGATCGAGA TGCTGCTCGG CCAGGCGCTG
GTGGCCTCGG GCAGCGCCGC CTCGACCGAA GAGGCGATCC GGATTCTGAA GTCGGCGCTG
TCGCGCGAGG CTGAAGCGCC GCTCGGCTAC AGCCAACTCG CGATGGCCTA TGGCCGCAAG
GGCGACTACG CCGAAGCCGA TCTCGCGTCG GCCCAGGCGG CCTTTCTGCG CGGCGACAAC
AAGACCGCGC GCGCACTCGC GGCGCGCGCC AAGACCCGCT TCCCGGTCGG CTCGCCGGGC
TGGGTCAAGG CGGACGATAT CGTCGAAGCG AAATCAACAT CCAAATAG
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| Protein sequence | MPNVMIETLP GGLRRKACAQ ASRLVAILSA AALALAPVPG LAQAPQPKGP PLLRDTEIEN
LLRDYTRPIL RVAGLEKQNI QIAIINDPNF NAFVADGRRI FVNYGALMQS QTPNQLIGVL
AHETGHLAGG HLSKLRTQLA QAQTQMIVAM LLGVGAMVAG SKAGPNSGAG NIGAAAISAP
QELIRRNLLS YQRQQEENAD KAAVKFLDAT GQSAKGMYET FRRFTDESLF AARGADPYAQ
SHPMPAERVR ALEELARSSP NWDKKDDAAL QLRHDMMRAK TSGFMERPDT VYRRYPSSNT
SLPARYARAI STYLHGDPRS ALAQIDGLIQ AEPNNPYFYE LRGQALLEGG RPQEAIAPLR
KALSLSRSAP LIEMLLGQAL VASGSAASTE EAIRILKSAL SREAEAPLGY SQLAMAYGRK
GDYAEADLAS AQAAFLRGDN KTARALAARA KTRFPVGSPG WVKADDIVEA KSTSK
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