| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2986 |
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| Symbol | |
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| ID | 3910785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3401005 |
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| End bp | 3402063 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884892 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_486599 |
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| Protein GI | 86750103 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0275567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAATG ACCACGAACG CAGCATGGCG TATGCCGAGC TGGCGCTGAA CCAGATCCGG
GCGCTGCGGC AGGGCGCGAT GCCGCGCAAC TACGAGATCT GGTACGTCTA CGCCACCGGC
TACAACGCCG AGCTCAACAA GGCGATCAAC GAGGCGCTGG CCCAGAACGG CCGGCTGTCG
GACGCCGACC TCGAGCAGCT ACACGATAGC TATTTGTCGC ACGGCCGCAC CCACGAGCGC
ATCGACCGGA TCGGCGCCCG CGTCGTCAAC GAGATCGACG ACATGATGTC GCTGCTGTCC
GATGCGCTCG GCACCACCGC GACGTTCGGC GACAACCTGC AGGGCGCGAG CCAGAACCTG
TCGATCGCCA CCGACCACGA GCAGATCAAG GCGATCATCG AGCGGCTGGT CGGGTCGACC
CGCGAGATGC AGCAGGCCAA CCACGCCCTC GAAGAGCGGC TGTCCTCGTC GCGGCAGGAA
ATCACCAATC TGCAGGCCAG CCTCGAGGCG ATCAGCGCCG AGAGCCTGAC CGATCCCTTG
ACCGGCCTCG GCAACCGCAA GCATTTCGAC CGCGTCGTCA CCGAAGCGGT GCGCAGCGCC
ACGGTGAGCC GGCTGCCGCT GTCGCTGCTG ATGATGGACA TCGATCACTT CAAGTCGTTC
AACGACAATT ACGGCCACCT CACCGGCGAT CAGGTGCTGC GGCTGGTCGG CATGACGTTG
AAGCAGAGCA TCAAGACCAA GAACGTCCCG GCGCGCTACG GCGGCGAGGA ATTCGCCGTG
GTGCTGCCGG ACACGCCGCT GCGCCAGGCG CTGATGGTCG CCGACGACAT CCGCCGCGTG
GTGATGTCGA AGGAATTGAA GAAGAAGTCG ACCGGCGAGA TCCTCGGCCG GGTGACGCTG
TCGGCCGGCG TCTCGACGCT GAAGCCGGAC GACGACGCCG ACGCGCTGAT CGAACGCGCC
GACGCCTGCC TGTATTCGGC CAAGCGCAAC GGCCGCAACC GGGTGATCTG CGAAACCGAT
CCTGAATTCC GCAGCGTCGC GCCCGCCAAG GTCGCGTAG
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| Protein sequence | MQNDHERSMA YAELALNQIR ALRQGAMPRN YEIWYVYATG YNAELNKAIN EALAQNGRLS
DADLEQLHDS YLSHGRTHER IDRIGARVVN EIDDMMSLLS DALGTTATFG DNLQGASQNL
SIATDHEQIK AIIERLVGST REMQQANHAL EERLSSSRQE ITNLQASLEA ISAESLTDPL
TGLGNRKHFD RVVTEAVRSA TVSRLPLSLL MMDIDHFKSF NDNYGHLTGD QVLRLVGMTL
KQSIKTKNVP ARYGGEEFAV VLPDTPLRQA LMVADDIRRV VMSKELKKKS TGEILGRVTL
SAGVSTLKPD DDADALIERA DACLYSAKRN GRNRVICETD PEFRSVAPAK VA
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