| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2982 |
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| Symbol | |
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| ID | 3910781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3394162 |
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| End bp | 3395670 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884888 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_486595 |
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| Protein GI | 86750099 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0310724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCGC TGGCGCGGTG GGGACTATCG GCGATCGGGA TGATCGCCGC GGTGCTGATC
GGCAGCGCGC CCGCCGAGGC CGCCAAGCGC GTCGCGCTGG TGGTCGGCAA CAACGATTAT
CGCAACGTTC CGAAGCTGCA GAAAGCGGTG AACGACGCCC GCACCATGGG CGACGCGCTG
CGCACGCTCG GCTTTCAGGT GATGGTGGCG GAGAATCAGA ACCGCACGGC ATTCAGCCAG
AGCCTGCTGG CGTTCGATCA GGCGATCGAG CCCGGCGACA CAGCGTTCTT CTTCTACGCC
GGCCACGGTT TCGAAATTTC CGGCCAGAAC TTCCTGCTGC CGACCGATGT GCCGGCGGCG
ACCGAAGGCC AGGAGGAGCT GGTCCGCGAC GCCTCGGTGC TCGCCGACCG CATCGTCGAG
CGGCTGCAGA ATCGCGGCGC GCGCACTGCG ATCCTGGTGT TCGACGCCTG CCGCAACAAT
CCGTTCGAGC GCCGCGGCGT CCGCGCGCTG AGTGGCCGCG GCGGGCTGGC GCCGATGACG
ACGCTGCCCG AGGGCGTGTT CTCGGTGTTC TCGGCCGGGC CGCGGCAGAC CGCGCTCGAC
CGGCTGTCGG ACACCGACGC CGATCCGAAT TCGGTGTTCA CCCGGGTGTT CGCCAAGCAA
CTGCTCGATC CCGGCGAGAA CCTGGTGCAG GTCGCGCAGC GGACGCGCCG CGCCGTCAGC
GAGATGGCCG ACACCGTCGG CCATCGGCAG GTGCCGGTGT ATTTCGACCA GATGGTCGAC
GACGTGTTTC TGAACGGCGC GGCGAAGCCC GCCGCAGCCG CGGCCGCGCC GGTAGCGTCC
GCCGCGCCGC CGCAGAAGGT CGCCGCGCTG CCGCCGGTGG CGCCGCTGAA GCCGCCGACC
TCGGAGAGTC TCAACGCGCC GATCGCCAGC TTCTCCCGCC ACAATGGCGG CTGGACCGTG
GTGTTCTCGA TCGCTGATCC GACGCTCGGC ATCTCCTGGC GGCTCGGCGA CAGCGGCGAG
TTCCGCGAGA CCGGCTTCAT GGACACGCTC GATCCGCGCA CCCGCAAGCG GATGCCGAAC
CCGTCGATCC AGCTCCCCGC CGATGCCCAG GCCTCGACCA TCGAGGTGCG CTATGTCGAT
GCGCTCGGCG AGACGCAGGG GCCGTTTCCG ATCCGGTTCG AGCCGGAGGC TGCATTGCTG
CGCGACCAGC GCAAGATCCT CGACATGACC GCGACGAGCT GGCTGTCGTT TCGCGACTAC
AACGGCCTGC TGGTCTACTA CACGCATCTG ATGTCGTATC GCTGCGCGAT CCGCGAGGTG
AGGATCGGCA TCGACAGCGC GGTGCCCGAC AAGGTGCTGA AACTGCCCGC CTGCGACCTG
CGCGACCCGG TCGCGATCCC GAGCAGCGCC ACGCCCTATC TGAAATTGTC GCCCGGCGTG
AAGTCGGTGT CGGTCGAACT GACCTATCGC GACGGCTCGG TGTCGGAGAT CAAGACGTTC
CGGCGGTGA
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| Protein sequence | MRSLARWGLS AIGMIAAVLI GSAPAEAAKR VALVVGNNDY RNVPKLQKAV NDARTMGDAL
RTLGFQVMVA ENQNRTAFSQ SLLAFDQAIE PGDTAFFFYA GHGFEISGQN FLLPTDVPAA
TEGQEELVRD ASVLADRIVE RLQNRGARTA ILVFDACRNN PFERRGVRAL SGRGGLAPMT
TLPEGVFSVF SAGPRQTALD RLSDTDADPN SVFTRVFAKQ LLDPGENLVQ VAQRTRRAVS
EMADTVGHRQ VPVYFDQMVD DVFLNGAAKP AAAAAAPVAS AAPPQKVAAL PPVAPLKPPT
SESLNAPIAS FSRHNGGWTV VFSIADPTLG ISWRLGDSGE FRETGFMDTL DPRTRKRMPN
PSIQLPADAQ ASTIEVRYVD ALGETQGPFP IRFEPEAALL RDQRKILDMT ATSWLSFRDY
NGLLVYYTHL MSYRCAIREV RIGIDSAVPD KVLKLPACDL RDPVAIPSSA TPYLKLSPGV
KSVSVELTYR DGSVSEIKTF RR
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