Gene RPB_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2975 
Symbol 
ID3910774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3386429 
End bp3387337 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content73% 
IMG OID637884881 
ProductAlpha/beta hydrolase 
Protein accessionYP_486588 
Protein GI86750092 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.339139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATC CCCTGAACCG GGGCCGCGCC TTTGCGCGCG CCGCCCTGCC CGTCCTCGTA 
CCCACCGCGC GAGGCATCAT CGAACTCGCC GAATCCGGCG ACGGCCCTGC CGTGCTGGCG
CTGCATGGCG GCATGGGCGG CTATGACCAG AGCCTGCTGC TGGCGCGCGC GACGCTCGGC
GACGATCCAC GCCATCGCGT GCTGGCGCTG TCGCGCCCCG GCTATCTCGG CACGCCGCAG
GCGCGCGGCG CAACGCCCGA GCAGCAGGCC GATCTCTATG CCGCGCTGCT CGACACACTC
GGCATCGACA GAGCGATCGT CATCGCGGTC TCGGCCGGCG GGCCGTCGGC ACTGCATTTC
GGGCTGCGCC ATCCGTCGCG CTGCGCCGGC GTGGTGCTGG TGTCGTGCTG CACCGGCACG
CTCGAGGTGC CGCCACAGGT ACGGTCGCGC CTGCCGATGA TGAAATGGAT CGCCCGGGTG
CCGGGCCTCG TCGCGCTGAT GCGCTGGGGT GCGGCGCGCG ATCCGGACAA GGCGGCAAGC
CGCTCGATCC GCGATCCGGA GCTGCGCGCG CGGACGCTGG CTCACCCCAT CGCCGGCGCG
ATGCTGGCAG AGTTGCAGAC CGGCGTGTTC ACCCGGATGG CGCAGCGGCT GCCCGGCACG
CTGACCGACA CCGCGACCTT TGCCGCGATG CCGCCGATCG ACGTCTCGGC CCTGGCGCCG
CCGCTGCTGG CGATCCACGG CACAGCCGAC GCGGTGGTGC CGTTCGCCCA CGCCGAGCGC
GTCGCCCGCG CCGCGCCGCA CGGCGAGCTG CTGGCGATCG AGGGAGGCGA GCACGTCAGC
CTCTTCACCC ACCTCGACGA GGTGCGCGCG CGGGTCGGTG ATTTCGTCAG CAAATGCTGC
TCCACGTGA
 
Protein sequence
MLNPLNRGRA FARAALPVLV PTARGIIELA ESGDGPAVLA LHGGMGGYDQ SLLLARATLG 
DDPRHRVLAL SRPGYLGTPQ ARGATPEQQA DLYAALLDTL GIDRAIVIAV SAGGPSALHF
GLRHPSRCAG VVLVSCCTGT LEVPPQVRSR LPMMKWIARV PGLVALMRWG AARDPDKAAS
RSIRDPELRA RTLAHPIAGA MLAELQTGVF TRMAQRLPGT LTDTATFAAM PPIDVSALAP
PLLAIHGTAD AVVPFAHAER VARAAPHGEL LAIEGGEHVS LFTHLDEVRA RVGDFVSKCC
ST