| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2963 |
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| Symbol | |
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| ID | 3910762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3374817 |
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| End bp | 3375542 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884869 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_486576 |
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| Protein GI | 86750080 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.829022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTG CCGAACCGAT CGACGTCAAG GCCCTGGTGT TCGACATCTT CGGCACTGTG
GTCGACTGGC GCTCCAGCCT GATCGCCGAC TTCACGGCGT GGTCGGCGAC GCGCGGCATC
AGCGGCGACT GGGCCGGGCT GGTCGATGCG TGGCGGCAGG CCTATGTGCC GTCGATGGAC
GCGGTCCGCA AGAATCCGTC TGCCGGCTTC ATCATGCTCG ACGATCTGCA TCGCCGCTCG
CTGGAGAAGC TGGTGGTCGA GTTCGGCATC GCGGGGCTGA CCGAGGACGA TCTGCACTAC
ATGACGACCG GCTGGCACCG GCTGAAGCCG TGGCCGGATG TCGTCGCGGG GCTCGCCCGG
CTGAAATCGA CCTACATCAT CAGCCCGCTG TCGAACGGCA ATGTCGGGCT GCTGACGCGG
ATGGCCAAGA CAGTCGGGCT GCCGTGGGAC CTGATCCTCG GCGGCGATCT GTTCGAGCAC
TACAAGCCCG ACCCCGAGAC TTATCTCGGC GCCGCGCGGC TGCTGAATCT TCCGCCCGGG
CAGGTGATGA TGGTCGCCGC CCACAACAAC GACCTCGACG CGGCGCAGAA GCTCGGCCTG
AAGACTGCCT TCGTCGCCCG GCCGACCGAA TACGGCCCGC TGCAGAAGCA GGATTACGAG
GCGACCGGCG CCTGGGACAT CGTCGCCGCG GATTTCGGCG GCATCGCCGA TCGGCTGGGG
TGCTGA
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| Protein sequence | MPAAEPIDVK ALVFDIFGTV VDWRSSLIAD FTAWSATRGI SGDWAGLVDA WRQAYVPSMD
AVRKNPSAGF IMLDDLHRRS LEKLVVEFGI AGLTEDDLHY MTTGWHRLKP WPDVVAGLAR
LKSTYIISPL SNGNVGLLTR MAKTVGLPWD LILGGDLFEH YKPDPETYLG AARLLNLPPG
QVMMVAAHNN DLDAAQKLGL KTAFVARPTE YGPLQKQDYE ATGAWDIVAA DFGGIADRLG
C
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