| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2958 |
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| Symbol | |
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| ID | 3910757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3367955 |
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| End bp | 3369181 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884864 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_486571 |
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| Protein GI | 86750075 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.141235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCT TCGATTCCCG CTTCACGCCG ACCCGCCGCC GCCTGCTGCA AACCGCGCTC
GGCGCGGCTG TGATGTGGCC GGCCATCGCG CGCGCCGCCC CGGCCGGCTT CGACGCGTGG
CGCGACGGGT TCCGCAGCCG CGCGCTCGCC AAGGGCATCA CGCCGCAGAC CTGGGACCGC
GCGATGGCCC GGCTCGAGCC GGACATGAGC GTGTTCAAGA ATTTCCAGAA GCAGCCCGAA
TTCCACGAGC AGCTCTGGCA ATACATCAAC CGCCGCGTCT CCGACTGGCG CATCACCAAC
GGCCGCTTGG CGCTGCAGAA GACCGAGCCG CTGTTCGCCC GGATCGAGCG CGACTTCGGC
GTCGAGCGCG GCACGCTGCT GGCGCTGTGG GGCGTCGAGA GCGCCTATGG CGATCCCTTG
GTGCAGCAGA ACCACATGCG GCCGGTGTTT CCCTCGCTCG CGGCGCTGGC CTGGAACGAG
CCGCGCCGCA AAGCCTATTG GGAAACCGAA CTGATCAACG CGCTCAGAAT CGTCGATCGC
GGCTGGTCGA CGCCCGAGGA GATGCGCGGC TCCTGGGCCG GCGCGATGGG GCATACCCAA
TGGATGCCGG AAGTCTGGCT CAATGTCGGC ATCGACTACG ACCGCGACGG TCGCGTCTCG
CCGTTCGGCC GCCCCGACGA CGCCCTCGGC TCCAGCGCAA AATATCTGGT CAATCGCGGC
AAATATCGCC GCGGCGAGCA TTGGGGCTAC GAGGTCCGCG GGCCCGGCGG CGCGATCAGC
GGCAGCCGTT CGTATCTCGC GTGGTCGCGC TCCGGCGTCA GCCGCGTCGA CGGCGAGCCG
TTTCCCGATC CGCAGGCGAT GGCGCAGATG TGGGTGCCGG TCGCGGGCGG TCCGCAGTTT
CTGCTGGGAC CGAATTTCTA CGCGGTGCGC AGCTACAACC CGTCGATGAA CTACGCACTC
GCGATCTGCC ATCTCGGCGA CCGCATCCTC GGCGCCGGCC CGTTCGCGAA TCCGTTCCCG
GGCTCGGAGC GGGCGATGAC GCTGGCCGAA GTGCAGGAGA TGCAGACCCG GCTGACCCGC
GCCGGCTTCG ACACCGGCGG CACCGACGGC CGCGTCGGCA ACGATACGAT GAAAGCGGTG
CGCGATTATC AGGCGCGCGC CGGCATGCAG CCGGCCGACG GCTATGGCGG CCTCAAGCTG
CTTGCGCGGC TGCGGCAGGG CCCGTAA
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| Protein sequence | MASFDSRFTP TRRRLLQTAL GAAVMWPAIA RAAPAGFDAW RDGFRSRALA KGITPQTWDR
AMARLEPDMS VFKNFQKQPE FHEQLWQYIN RRVSDWRITN GRLALQKTEP LFARIERDFG
VERGTLLALW GVESAYGDPL VQQNHMRPVF PSLAALAWNE PRRKAYWETE LINALRIVDR
GWSTPEEMRG SWAGAMGHTQ WMPEVWLNVG IDYDRDGRVS PFGRPDDALG SSAKYLVNRG
KYRRGEHWGY EVRGPGGAIS GSRSYLAWSR SGVSRVDGEP FPDPQAMAQM WVPVAGGPQF
LLGPNFYAVR SYNPSMNYAL AICHLGDRIL GAGPFANPFP GSERAMTLAE VQEMQTRLTR
AGFDTGGTDG RVGNDTMKAV RDYQARAGMQ PADGYGGLKL LARLRQGP
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