Gene RPB_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2948 
Symbol 
ID3910747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3359331 
End bp3360143 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID637884854 
Producthypothetical protein 
Protein accessionYP_486561 
Protein GI86750065 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[S] Function unknown 
COG ID[COG0239] Integral membrane protein possibly involved in chromosome condensation
[COG1993] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00494] crcB protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.448115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.663745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC GTAGAATTCC CGATTGGGCG ATGCGCGCAT GGGAGCGCTT CACGCTCTAT 
GGCCTCATTG CATTGGGCAG CGTCATCGGC GGGTTGTCGC GGTACCTCGT CGGCGTTGCG
CAATTGGCGC TCGTCGGCCC ACCCTTTCCG TGGGCGATCC TGTTCGTCAA CGTCACCGGA
TCTTTCATTA TCGGCTTTTA TGCCACCCTG ACCGGGCCCG ACGGGCGGAT CTTTGCGGGG
ACACGCCAAC GCCAATTCGT GATGACCGGA ATCTGTGGGG GCTATACGAC CTTCTCGGGA
TTCAGCCTCG ACACGCTCCA GTTGATCCAT CATGGCCATC GCGCCGCCGC ATTGGCCAAT
GTCGCCGCAT CTCCGGTCGC GTGGCTGATT GCCGTCTGGG TCGGATACGC CGTTGCGACA
AGGCTGAACC GCTTGCGAAC CGTGGCTGCG ACAGGAGCGG AGGCTGAGAA TCTCCAGATC
CCCCGTCACG CGACGCTGCT GCGGATTTTC GTCGACGAAT CCGACCAACA CGACGGTATG
CCGCTCTACG AGGCGATCGT GCTGAAGGCC CGTGAAATGC AGCTGGCCGG TGCCACCGTA
TTTCGCGGAC CTGCCGGCTA TGGGCAGTCC AGCCAGATGC ATCTGGCAAA CGCCCTCGGC
GTTCCGGACA CTCTCCCCCT GATCATCGAG ATCATCGACG GCGAAGATGC TGTTTCGCGT
TTTCTGCCCG CACTCGACGA GATGATGCCC GGCGGGATGG TGACGATGGA GAAGGTTGAA
GTCCTGCAGT ATGGACGGCC GGCCGGCCGC TAG
 
Protein sequence
MTDRRIPDWA MRAWERFTLY GLIALGSVIG GLSRYLVGVA QLALVGPPFP WAILFVNVTG 
SFIIGFYATL TGPDGRIFAG TRQRQFVMTG ICGGYTTFSG FSLDTLQLIH HGHRAAALAN
VAASPVAWLI AVWVGYAVAT RLNRLRTVAA TGAEAENLQI PRHATLLRIF VDESDQHDGM
PLYEAIVLKA REMQLAGATV FRGPAGYGQS SQMHLANALG VPDTLPLIIE IIDGEDAVSR
FLPALDEMMP GGMVTMEKVE VLQYGRPAGR