Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2887 |
Symbol | |
ID | 3910681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3287673 |
End bp | 3288146 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637884788 |
Product | cyclase/dehydrase |
Protein accession | YP_486500 |
Protein GI | 86750004 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAT TTTCCAGCAA GCGCCGGGTG CCGCACAGCG CCGAACAGAT GTTCGATCTG GTCGCCGACG TCGAGCGCTA TCCGCAATTC GTGCCGCTCT GCAAGGCGCT GAAGATCCGG CAGCGCACGC CGCAGGACGA CGGCACCGAA GTGATCATCG CCGACATGAC GGTGTCGTTC AAACTGGTGC AGGAAACCTT CACCAGCCGC GTCACGCTCG ACCGCGCCAA TCTCAAGATT CTCGTCGAAT ATCTGCAGGG CCCGTTCAGC AATCTGGAAA ACCGCTGGAC CTTCGTGGCG AAGACCGAGC GCGCCAGCGA AGTCGGCTTC TTCATCGCCT ATGAATTCAA GAGTCGCATC CTGGCGACGC TGATGGGCGC GATGTTCGAC ACCGCCTTCC ACCGCTTCGC CGCCGCCTTC GAGAGCCGCG CCGATCAGGT CTATGGCGGC GCCCCGAAGC TGTCGCGGGC GTAG
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Protein sequence | MPQFSSKRRV PHSAEQMFDL VADVERYPQF VPLCKALKIR QRTPQDDGTE VIIADMTVSF KLVQETFTSR VTLDRANLKI LVEYLQGPFS NLENRWTFVA KTERASEVGF FIAYEFKSRI LATLMGAMFD TAFHRFAAAF ESRADQVYGG APKLSRA
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