Gene RPB_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2887 
Symbol 
ID3910681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3287673 
End bp3288146 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content63% 
IMG OID637884788 
Productcyclase/dehydrase 
Protein accessionYP_486500 
Protein GI86750004 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAT TTTCCAGCAA GCGCCGGGTG CCGCACAGCG CCGAACAGAT GTTCGATCTG 
GTCGCCGACG TCGAGCGCTA TCCGCAATTC GTGCCGCTCT GCAAGGCGCT GAAGATCCGG
CAGCGCACGC CGCAGGACGA CGGCACCGAA GTGATCATCG CCGACATGAC GGTGTCGTTC
AAACTGGTGC AGGAAACCTT CACCAGCCGC GTCACGCTCG ACCGCGCCAA TCTCAAGATT
CTCGTCGAAT ATCTGCAGGG CCCGTTCAGC AATCTGGAAA ACCGCTGGAC CTTCGTGGCG
AAGACCGAGC GCGCCAGCGA AGTCGGCTTC TTCATCGCCT ATGAATTCAA GAGTCGCATC
CTGGCGACGC TGATGGGCGC GATGTTCGAC ACCGCCTTCC ACCGCTTCGC CGCCGCCTTC
GAGAGCCGCG CCGATCAGGT CTATGGCGGC GCCCCGAAGC TGTCGCGGGC GTAG
 
Protein sequence
MPQFSSKRRV PHSAEQMFDL VADVERYPQF VPLCKALKIR QRTPQDDGTE VIIADMTVSF 
KLVQETFTSR VTLDRANLKI LVEYLQGPFS NLENRWTFVA KTERASEVGF FIAYEFKSRI
LATLMGAMFD TAFHRFAAAF ESRADQVYGG APKLSRA