Gene RPB_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2804 
Symbol 
ID3910597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3195426 
End bp3196250 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID637884704 
ProductOmpA/MotB 
Protein accessionYP_486417 
Protein GI86749921 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.218866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCAA TGCTGACCGG GAAGGGCTGC AGCAAGAAGA AGCTCGACGA TGAGCACACC 
GGTCATGGCT GGTACGTCTC CTTCGCCGAC TTGATGGGGC TTCTGGTCGC CTTCTTCGTC
GTGCTGGTGT CGTACTCGAC CCAGGACGTC AAAAAGCTTC AGATCGTCGC CGGCTCGATG
CGCGACGCCT TCGGCGTGCA GCATCAGGCG CGCTATTCCG GCGCGGTCGA GACCGACGGG
ACGCCGGTTC AGGGCAGGGT CGCCAAAACC GACAATGCCG CGCTGGATCA GGCCGGCGGC
GCCGGCAGTT CGGCGCAGGC CAAGGCCGAA CGCGAATTCG CGCTGGCGTC GGCGTCGCTC
CGGCAGGCGC TGCAGGATGT GCCCGAACTG TCCGAACTGT CGAAAAACGT GGTGTTCGAG
GAGACCCCGA CCGGTCTCAA TCTCGAACTG ACCGATCAGG ACGGCAGGCC GATGTTTGCG
GACGGCTCCT CGGTGCCGTA CGAGCGGACC CGCTTGCTGA TCGCAAAGCT CGCGGCGCCG
CTGCGGGCCA CCTCGCTACG GGTCAATATC GTCGGTCACA CCGCCGCGAC GGCGGTGCCG
GCCAATGGCG ACTACGATTC CTTCGACCTG TCGACCGGGC GCGCCAATGC GGTACGTCAG
ATCCTGAAGC GCGAGGGGCT GTCATCGAAC CGCGTGATGT CGGTGGCGGG GAAGGGCGAC
GGCGAGCCGC TGTTTCCGGA AGCGCCGATG CTGGCCGCCA ACCGCCGGGT GACCATCAGC
CTGCTGCGGG AGAGTCCGCC GCTGCCACCG GATATGGCTC CCTGA
 
Protein sequence
MLPMLTGKGC SKKKLDDEHT GHGWYVSFAD LMGLLVAFFV VLVSYSTQDV KKLQIVAGSM 
RDAFGVQHQA RYSGAVETDG TPVQGRVAKT DNAALDQAGG AGSSAQAKAE REFALASASL
RQALQDVPEL SELSKNVVFE ETPTGLNLEL TDQDGRPMFA DGSSVPYERT RLLIAKLAAP
LRATSLRVNI VGHTAATAVP ANGDYDSFDL STGRANAVRQ ILKREGLSSN RVMSVAGKGD
GEPLFPEAPM LAANRRVTIS LLRESPPLPP DMAP