Gene RPB_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2705 
Symbol 
ID3910498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3090266 
End bp3090925 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID637884605 
Productnitrile hydratase 
Protein accessionYP_486318 
Protein GI86749822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.745191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.533217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGCG CGCACGACAT GGGCGGCATG GATGGTTTCG GCCCGGTGGT GCCGGAGGCG 
AACGAGCCGC TGTTTCACGC CGCATGGGAG CGCCGCGCCT TCGCGCTGAC GCTGGCGATG
GCGCGGCCCG GCGGCTGGAA TCTCGACATG ACGCGGTTCG CCCGCGAGAA TCGATCGCCC
TTGGACTATC TGTCGAAGAG CTACTACCAG ATCTGGCTTG CCGGCCTCGA ACGGCTGATG
GCGGAACGTG GACTGGTCAC GTCCGACGAG ATCGCCGCCG CCCGGCCGCT GCATCCGCGC
CGCGACGTCG CAGCACTGTC GGCGGACGAT GCCGCGCCGA TGCTGGCGCG CGGCGCGCCG
ACCGAACGTC CGGCGCCGGC GCCGGCTCAT TTCGCGATCG GCGACCGCGT CCGCGCCAGG
AACATCCACC CGCACACCCA TACGCGGCTG CCGCGCTATG TCCGCGGCCA TGTCGGCGTG
GTCGAGCTGG TGCATGGCGC GCATATTTTT CCGGACAGCC ACGCGCTGGG CGCCGGCGAA
CAGCCACAAT GGCTCTACAC CGTCACTTTC GACGGCCGCG AATTGTGGGG CGACGATTGC
GATCCGTCGC TGCGGATCTC GGTCGACGCC TGGGAGAGCT ATCTGGAGCC TGTGCGATGA
 
Protein sequence
MDGAHDMGGM DGFGPVVPEA NEPLFHAAWE RRAFALTLAM ARPGGWNLDM TRFARENRSP 
LDYLSKSYYQ IWLAGLERLM AERGLVTSDE IAAARPLHPR RDVAALSADD AAPMLARGAP
TERPAPAPAH FAIGDRVRAR NIHPHTHTRL PRYVRGHVGV VELVHGAHIF PDSHALGAGE
QPQWLYTVTF DGRELWGDDC DPSLRISVDA WESYLEPVR