Gene RPB_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2683 
Symbol 
ID3910476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3065291 
End bp3066091 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID637884583 
Productputative hydrolase 
Protein accessionYP_486296 
Protein GI86749800 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0797349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.841519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA TCCTGACCAT TCTCGGCTCC GGCTCCTCCG CCGGCGTGCC GCGCCCGGCG 
CTCGGCTGGG GCGCCGCCGA TCCGAGCAAT CCGAAGAACC GCCGCCGGCG CTGCTCGCTC
CTCGCGGAGC GGGTGACACC CGACGGCATC ACACGGGTGC TGATCGACAC TTCGCCGGAC
CTGCGCGAGC AACTGATCGA CGCCGACGTC GATCATCTCG ATGCGGTGTT TCTGACCCAC
GAACACGCCG ACCAGACCCA CGGCATCGAC GACCTGCGCT CGGTGGCGAT GCACATGCGA
CGACGCATCC CGGTCTATCT CAACCAGGCG ACCGCCGAGC ACGTCGTGTT CCGCTTCCAC
TACTGCTTTG TGACGCCGCC CGGCAGCTCC TATCCGCCGA TTCTGGACGA GCACCGCATC
GAGACCGGCG AAAGCCGCAG CATCGAAGGC GCCGGCGGCG AGCTGACGCT GGCGCCGTTC
CTGGTGCAGC ACGGCGACAT CCCGGCGCTC GGCTACCGCA TCGGCGCCGC CGCCTACACG
CCGGACGTCA GCGACATTCC CGAGCAGAGT TTTCCGGCGC TCGAAGGCCT CGACCTGTGG
ATCATCGACG GCCTGCGCTA CAAGCCCCAC GGCAGCCATT TCCACATCGA CGCCGCGCTG
GGATGGATCG ACCGCTTCAA GCCGAAGCGC GCGGTGATCA CCAACATGCA CGCCGACATC
GACTACGAGA CGCTGCGCAA GGAATTGCCC GACGGCGTGG TGCCGGGGTT CGACGGGATG
CGGTTGGAAG TTGAGGGCTG A
 
Protein sequence
MTLILTILGS GSSAGVPRPA LGWGAADPSN PKNRRRRCSL LAERVTPDGI TRVLIDTSPD 
LREQLIDADV DHLDAVFLTH EHADQTHGID DLRSVAMHMR RRIPVYLNQA TAEHVVFRFH
YCFVTPPGSS YPPILDEHRI ETGESRSIEG AGGELTLAPF LVQHGDIPAL GYRIGAAAYT
PDVSDIPEQS FPALEGLDLW IIDGLRYKPH GSHFHIDAAL GWIDRFKPKR AVITNMHADI
DYETLRKELP DGVVPGFDGM RLEVEG