| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2635 |
|---|
| Symbol | nrdR |
|---|
| ID | 3910427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3016008 |
|---|
| End bp | 3016490 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884534 |
|---|
| Product | transcriptional regulator NrdR |
|---|
| Protein accession | YP_486248 |
|---|
| Protein GI | 86749752 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.436717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.516899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGCC CGAACTGCAA CAGCCTCGAT ACCCAGGTGA AGGACTCCAG GCCCACCGAG
GATTCCTCGG TGATCCGGCG GCGACGGGTC TGCATCGCCT GCAATTTCCG CTTCACCACC
TTCGAGCGGG TGCAGCTCCG CGAGCTGACG GTGATCAAGC GCAACGGCCG CCGGGTGCCG
TTCGATCGCG ACAAGCTGGT GCGCTCGCTG CAGATCAGCC TGCGCAAGCG GCCGGTCGAG
CCGGAGCGGG TCGAGCAGAT GGTATCGGCG ATCGTGCGCG AGCTGGAAAG CGGCGGCGAG
GCCGACATCT CGTCGGAGAC CATCGGCGAG ATCGTGATGG ACCATCTGCG CAAGCTCGAC
GACGTCGCTT ATGTGCGGTT CGCCTCGGTG TATCGCAATT TCCGCGAGGC CAAGGACTTC
GAGGCGGTGC TCGGCGAATT GTCCGGCGAG GAGGAGGCCC GGCCGGCGCT GGTCCGCAAA
TGA
|
|---|
| Protein sequence | MRCPNCNSLD TQVKDSRPTE DSSVIRRRRV CIACNFRFTT FERVQLRELT VIKRNGRRVP
FDRDKLVRSL QISLRKRPVE PERVEQMVSA IVRELESGGE ADISSETIGE IVMDHLRKLD
DVAYVRFASV YRNFREAKDF EAVLGELSGE EEARPALVRK
|
|---|
| |