| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2554 |
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| Symbol | |
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| ID | 3910343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2928963 |
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| End bp | 2931293 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884452 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_486169 |
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| Protein GI | 86749673 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.92859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTT TTCTGAGCGC GCTTTGCGCT GCGTCCGTCG CTGCCGTGAC GGTCCCCGAT
CTTGCCTTTG CCCAAACGTC GACCCAAGCC AACACCGGCC TGCCGAGTGT GGTGGTCGAG
CCGCCGACGC GAAAGCCGAC AAAGAAGCGC CAGGCGAGCG CCACGGCTCC GCGCGCCGCT
CCGCGGGCGC CGGCGCAGGC GGCGGTCAGC ACCGCGCCGC CGAGCAGCGG TGCGCCGGTG
ATCCAGACCA CCGCCGGACC GGTGCAGGGC ATTCGCGCGC TCACGGCGTC GTCTGCGACC
CGGACCGACA CCCCGATCGA ACAGATCCCG CAATCGATCC AGGTGGTGTC GCGCCAGCTC
ATCGAGCAGC AGGGCGCGGT GACGGTCACC GAGGCGGTGC AGAACGTCAG CAACGCCCAG
GCGGTCAATC CGTTCGTCAT CGCCAACACC GACCTGCAGC AGCTCAAGAT CCGCGGCTTC
TCTGCGGAAC TTTGGCGCGA CGGGATGGTG AGCATGTACA ACCCTGGCGA CCGCGACGGG
CTGGTCAATG TCGAGCGCAT CGAGGTGCTG AAGGGCCCGA ACGCGATCCT CTATGGCGGC
GGCCCCGGCG CCCCGATCGG CGGCGCGGTC AACGTCGTCT CCAAACTGCC GACCGACAAG
GCCAGCCAGG AATTCGGCAT CGGGCTGGGC TCCTATCAAT ACTGGAACCC GTTCTTCGAC
ATCAACCAGC CGCTCAACCA GGAGAAAACC GCGCTGTTCC GCATCACCGG CGAATACACC
GGCAACAACA GCTTCGTCGA TGTGCTGGAA TCCAAGCGCT ACAGCATCAA TCCGACGCTG
ACGCTGACCA ATCGCGAAGA CACCACGCTG ACGATCCAGG GCTTCCTGTC GCGCCAGCAG
CAGCAAGCCT ATCAGGGGCT GCCGGTGTAC GGCACCATCC TCGGCGATTT CCGCGCGGCC
CGCGATCTGT ACATCGGCCC GTCGAACATC GAGCCGAGCT ATTCGAAGAC GCACGGCGCC
ACCGTGACGC TCGATCATCA GTTCAATTCG GTGTGGTCCG CGAACATCAA GGCGCGCTGG
AGCCAGTCGG AATTCGATCA GCTATCGCAA TGGGCGTTTG GCGGCGACGC CTTCGGCGCG
ACGCCTGCCT TCGCGCCGTC GACCTGGCTG CTGTCGAATC TCGAAGTGTT CCAGAAGCAG
CAGGAATTCA CCATCAATCC CAGCGTCAAG GCGAAGTTCG ACACAGCGAT CAGCCGCAAC
ACGCTGCTGC TCGGCGCGGA CTACAGCCGC GTCACCGATC GCGGCTTCAT GACCGGCGAC
AATCTCGGCA ACACTTGCTT CCTGACCACC TTCGCGTGCC CGCCCGCGGC GGTCGACCTG
CAGAATCCGG TGTTCACGAT CCCGTACACG CGGCCCAATC CGAGCGCCGG CGCGGAATAC
GCGGCGTATT TCAACTTCGA CAACACCTAC ACCACCAAGG GCGGTTACGC GCAATTACAG
TCGTCGCTGT ACGACCGTGT CCATGTGCTG GCCGGTGCGC GCCTTGCCAA TATCGACATC
AGCTACACCG AGAACGCGCT GGTGGTGCCG TCGACGTTCG TGACGGACAC GACCAAGCTG
TTGCCGCGCG CGGGCGTCGT GGTCGATCTG GTCAAGGGGC TGTCGGCCTA TGCCAGCTAC
AGCGAAGGCA TGCGCTGGGC GGGATTCACC CAGGCGGTCG CGCGGCCGGA GCCCGAGTTG
TCGCAGCAAG TCGAAGCGGG GTTGAAGTTC AATATCAATG CTGAATTGTC CGGCAGCGTC
GCGGTGTTCG AGATCCATCG CGACAACGTG CCGGTGACCA TCGCGCTCGG CGTCGCGGGG
CTGACGCAGC AGAAGTCGCG CGGGTTCGAG ACCGACATGA CCTGGCAGCC GAACCGCAAC
TGGAGCTTCC TCGGCAGCTA CGGCTACACC GATGCGACCT TCGCCGGAGC GTTCGTCGAT
TCGTCGGGCG TCATCCCGGC CGGCAACAAG CTGCCCTACG TGCCCGAACA TTCCGGGCGG
GTGTGGGCGA ACTACAAGTT CGATCCGAAC GTACTGCCGG GTTGGAGCGT CGGCGCCGGC
GTCTATGCGG CATCGAGCCA GTATGTCGAC AACGCCAATC TGTGGAAGAC CGACGGCTAC
TACACGGTCG ACGCCAAGAT CGGCTACGAG AAGGACGGCT TCCGCGCCTC CATTGCGCTG
AAGAATCTGA CCGGCGAAAA GTACTTCACG CCGTACGCCT GGCTCGGTGG GCAGGTGGCG
CCGGGCGCGC CGCGGATGGT GTACGGCCAG CTCAGCTACC GCTTCAACTG A
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| Protein sequence | MQRFLSALCA ASVAAVTVPD LAFAQTSTQA NTGLPSVVVE PPTRKPTKKR QASATAPRAA
PRAPAQAAVS TAPPSSGAPV IQTTAGPVQG IRALTASSAT RTDTPIEQIP QSIQVVSRQL
IEQQGAVTVT EAVQNVSNAQ AVNPFVIANT DLQQLKIRGF SAELWRDGMV SMYNPGDRDG
LVNVERIEVL KGPNAILYGG GPGAPIGGAV NVVSKLPTDK ASQEFGIGLG SYQYWNPFFD
INQPLNQEKT ALFRITGEYT GNNSFVDVLE SKRYSINPTL TLTNREDTTL TIQGFLSRQQ
QQAYQGLPVY GTILGDFRAA RDLYIGPSNI EPSYSKTHGA TVTLDHQFNS VWSANIKARW
SQSEFDQLSQ WAFGGDAFGA TPAFAPSTWL LSNLEVFQKQ QEFTINPSVK AKFDTAISRN
TLLLGADYSR VTDRGFMTGD NLGNTCFLTT FACPPAAVDL QNPVFTIPYT RPNPSAGAEY
AAYFNFDNTY TTKGGYAQLQ SSLYDRVHVL AGARLANIDI SYTENALVVP STFVTDTTKL
LPRAGVVVDL VKGLSAYASY SEGMRWAGFT QAVARPEPEL SQQVEAGLKF NINAELSGSV
AVFEIHRDNV PVTIALGVAG LTQQKSRGFE TDMTWQPNRN WSFLGSYGYT DATFAGAFVD
SSGVIPAGNK LPYVPEHSGR VWANYKFDPN VLPGWSVGAG VYAASSQYVD NANLWKTDGY
YTVDAKIGYE KDGFRASIAL KNLTGEKYFT PYAWLGGQVA PGAPRMVYGQ LSYRFN
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