Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2534 |
Symbol | |
ID | 3910323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2899276 |
End bp | 2900967 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637884433 |
Product | hypothetical protein |
Protein accession | YP_486150 |
Protein GI | 86749654 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG AGGTAAAACG TTTCGTCCAT GACGAAGCGA ACACGGAACG GATCCGTGTC GCCATGCGCG CTGCCATCGC CAATATCGAA ACGAATCTAG TTCCGGTCGA GCGCTTGCAG CCAAGGACGC GGCTCGCGCT CGCGGTTTCT CTGCTCGGAG GCGATCATGC GCCGCGAAAG CAGAAATTCA CTGCAGGCCT CCGGAACGAA CTCCTAAAAG TGGATGCCGA CCAGCGTCAC TACTGGCTGA GCACCTTCTA CACCCTGCTT ATGAGTGCGA CTTTGCGCCG TGATATGGCA ACGTTCTTTA CGCCTCCCGC GATAGTCCGC CATCTGCTTG CGCGAGCCGA AAACGCTGGG CTGGATCTGA CAACTGCCCG TGTGATCGAC CCTGCAGCGG GCGGCGCCGC ATTTGTGTCC ACCTTGGCCG GCCGCATGAC CGAGCTTGGG TGCAAGACGG ACGATATCAA GAAGCGCCTC TCGGGAATCG AGATAGACGA ACATCTGGCG CTGCTGGGTG AAATACTCCT CAGAGACCGG TTAAACGAAA CGCGTGCTGC TGCACGACGC TCCATTCAGG TCGGCGATTC ACTGAAAATC GCCAAGACCG CATTCTACGA CGCAGTCTTC GTTAACCCCC CGTACGGCCG GTTGCTCGGC CTTGGGCCAC AGCTTCCAGA GAGTTGGCTA GCGTTCGCTG CGCGTGGGCA CATCAACCGA TATGCCCTTT TCATCGACCT TGCCTTCCGG ATGGCGAAGC CTGGCGGTCT CGTCGCCACG GTCACGCCAT CCAGCTTCTT GGCCGGCTCG CTGTTTCAGA GGTTGCGTGA GTACATCCGC TCAAAGGCCG AAGTGGTCCG CATCGACATT CTGGAGCGCA AGGACGTGTT TCACGACGTC CAGCAAGACG CATGCGTATC GGTGTTCCGG ATGCGCTCTC AGTCTGCTTG CCTACCGGCG TTCGTGCCCA AGCTGGGTCG GGTGGATCGC AATTGGCACT TCCAGGAGAT CGGAACCATC ACCGCGGCGT CATCTGCTCA AGGGGCTCCC TGGGTTCTTC CGGAGCGCGC CGACGGAAGC GACGAAGCGC TGCGGTCTTG CAGGTCGCGT TTGTCGGACT ACGGCGTTAC GCCAAAAGCT GGGTATTTTG TCTGGAATCG CGAAAAAGAG CGCCTTCAGA GCGGTCGAAA GTTTGGAACG GACTTCCCTC TCATCTGGGC GAGAAACATC AAGCCCGGAG ACCCATGCAA ACCCCGAAGC AAGTCCGGCA CCGGCATCGA CTTCGTCTCC TTCGACAAGG ACAATCCGGG CATCATCCGA CGTTCAGCGA TCATTCTCCA GCGGACAACG AATAGCAGGC AACCGCGGCG CCTAGTCGCC GCCGTGATTC CCCGACAGGT GGTCAAGCGT CACAAGGGCT TCGTCGCCGA GAACCACACC ATACTTCTGA TTCCGCACGA ACGCTCGAAC CTGTCGCTCC TGTGCAAACT GCTGAACTCG AAAGCGGTTG ACAAACGCTT TCGGTGCATC GGCGGGACAT CGAGCATTTC GATATCGGCC CTGAAGGATT TGCCCCTGCC CGATCCGCGC GACATGCGGA CCGCGATGTC GCGGATCAAG GATTTCGAGA CGGCCGTCGA GGTTGCCTAT GAGGCCTCCC GTAAGCGAAA GACCGTGGAA AGAGCGGCAT GA
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Protein sequence | MSAEVKRFVH DEANTERIRV AMRAAIANIE TNLVPVERLQ PRTRLALAVS LLGGDHAPRK QKFTAGLRNE LLKVDADQRH YWLSTFYTLL MSATLRRDMA TFFTPPAIVR HLLARAENAG LDLTTARVID PAAGGAAFVS TLAGRMTELG CKTDDIKKRL SGIEIDEHLA LLGEILLRDR LNETRAAARR SIQVGDSLKI AKTAFYDAVF VNPPYGRLLG LGPQLPESWL AFAARGHINR YALFIDLAFR MAKPGGLVAT VTPSSFLAGS LFQRLREYIR SKAEVVRIDI LERKDVFHDV QQDACVSVFR MRSQSACLPA FVPKLGRVDR NWHFQEIGTI TAASSAQGAP WVLPERADGS DEALRSCRSR LSDYGVTPKA GYFVWNREKE RLQSGRKFGT DFPLIWARNI KPGDPCKPRS KSGTGIDFVS FDKDNPGIIR RSAIILQRTT NSRQPRRLVA AVIPRQVVKR HKGFVAENHT ILLIPHERSN LSLLCKLLNS KAVDKRFRCI GGTSSISISA LKDLPLPDPR DMRTAMSRIK DFETAVEVAY EASRKRKTVE RAA
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