| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2520 |
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| Symbol | |
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| ID | 3910309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2878678 |
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| End bp | 2879829 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884419 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_486136 |
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| Protein GI | 86749640 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.82991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.937702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCCGT CCATGCCCAT CACGGTGTTG TCCAGGTTCC TGCATCCCGA TCCGCGGATT
CGCCGCGAGC TGGTCGATCT GCTGTACACA TCGCTGCCGC AGGTGATGGC GATCAGCGTC
ACCTCGGTGA TCGGCGCGGT CGCGCTCGCG CTGATCGACG GCGATCCCGG CTACGCGGTG
ATCGCGGTGC TGATCCTGAT CGCCGCCTCG GCGCGGATCG CCTCGCTGCT GCGCTACAAA
TCCCGCGCTG GGCAATTGTC CGATGCCGAC GTGGTGCGCT GGGAGCGGAT CTACGGCGCC
GGCGCCTGCG CCTTCAGCCT CGCGCTCGGC GCGCTGTCCT ATCGGACGTT GCATCTCGGC
GACGCGCCCG GCGCCTGGCT GGCGTTCGGC CTATCGATGT CGTTCTGCGT CGGCATGGTG
TCGCGCGCGG CGATCCGGCC CTGGGTCATT CTGACCGCTG CGGCGACCCT GCTGCTGCCG
ACCGTCGTCG CCGGGCTGAT GCGTCCCGAG CTCACCTACA ATGTCGGCGC CGTCATGCTG
GTGTTCTTCT GGCTCACCTT GCGCGAAGCC TCCAAGCATC TCAGCGCCGC CTTCGTCGAG
CGCCTCGAAG CCCGGCATCG GCTGGCGCTG CAGGCGACCC ACGATTTCCT CACCGGTCTG
CCGAACCGCG CCGCGTTTCT GCAATCGCTC GCCAGCATCG GCGGCGGCCA TTTCGCCATC
ATCGCGATCG ATCTCGACGG CTTCAAGCCG ATCAACGACC GTCACGGTCA TCACGCCGGC
GACGATCTGC TGCGCCAGGT CGCGGAGCGG CTGACCGCCT GCGCCGGCGC CGACGGAATC
GCCGCGCGCT TCGGCGGCGA CGAATTCATG CTGCTGGCCC CGGTCGCCGC CGGCGAGGAC
GGCCGCGCCG AGGCGCTGGC GCTGGCGCGC AGGGCGATTG TCGACCTCTC GATGCCCTAT
CGGCTGTCGG ACCTGCCGGT TTGCATCGGC GCCAGCGCCG GCATTCTGGT CAGCGACGGC
GGCGTTGCCG ACGGCGCGAC GTCGCAACTG CTGCAGCGCG TCGACCGCGC GCTGTATGCC
GCCAAGCGCG GCGGGGGCGG CTATGCCTGG GCCGACGCGG ATGACGAGCC CGCACGCCGC
GCGGCGGTCT AG
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| Protein sequence | MVPSMPITVL SRFLHPDPRI RRELVDLLYT SLPQVMAISV TSVIGAVALA LIDGDPGYAV
IAVLILIAAS ARIASLLRYK SRAGQLSDAD VVRWERIYGA GACAFSLALG ALSYRTLHLG
DAPGAWLAFG LSMSFCVGMV SRAAIRPWVI LTAAATLLLP TVVAGLMRPE LTYNVGAVML
VFFWLTLREA SKHLSAAFVE RLEARHRLAL QATHDFLTGL PNRAAFLQSL ASIGGGHFAI
IAIDLDGFKP INDRHGHHAG DDLLRQVAER LTACAGADGI AARFGGDEFM LLAPVAAGED
GRAEALALAR RAIVDLSMPY RLSDLPVCIG ASAGILVSDG GVADGATSQL LQRVDRALYA
AKRGGGGYAW ADADDEPARR AAV
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