| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2450 |
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| Symbol | |
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| ID | 3910239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2806085 |
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| End bp | 2807311 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884349 |
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| Product | urea/short-chain binding protein of ABC transporter |
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| Protein accession | YP_486066 |
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| Protein GI | 86749570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.045034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.258523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTTA TCTTCTCGTG CCGTCGCGCC GTGGCCATCG CGCTGGCCGG CGCTGCCTTC
GCATCGCCCG CGTTCGCTCA GGACAAGACC GCCAAGATCG GCGTTCTCAA CGACATGTCG
AGCCTCTACG CCGACATCGG CGGACCGAAC TCGGTCGTCG CCGCCAAGCT CGCCATCGCT
GATTCCGGTC TCGAAAAGAA GGGCTGGAAA ATCGATCTGG TCGTCGGCGA CCATCAGAAC
AAGCCGGATA TCGGCGTCAA CGTCGCGCGC CAGTGGATCG ACGTCGACAA GGTCGACATG
ATCACCGACA CGCCGAACTC CGGCGTCGCG CTCGCGGTCA GCAATCTGGT CAAGGAAAAG
AACATCATTC TGATGAACTC GGGCGGCGCC AGCGCCGACC TGACGGGCAA ACAGTGCACG
CCCAACACGA TCTCGATGAC CTACGACACC TACATGCTGG CCCACGGCAC CGGCCAGGCG
CTGACCAAAG CCGGTGGCAA CACCTGGTTC TTCCTGACCG CGGACTACGC GTTCGGCGCC
GCGCTCGAGC GTGACACCAC CGCGGTGGTC AAGGCCAATG GCGGCCAGGT GCTCGGCGGC
GTCAAGCATC CGCTCAACAC CGCCGACTTC TCGTCGTTCC TGCTGCAGGC GCAGGCGTCC
AAGGCCAAGG TCATCGGCCT CGCCAATGCC GGCGGCGACA CCACCAATTC GATCAAGCAG
GCTTCGGAAT TCGGCATCAC CGCCGGCGGC CAGAAGCTCG CCGCGCTGCT GCTGTTCATC
AACGACGTGC ACTCGCTCGG CCTCAAGGTC GCGCAGGGCC TGACCTTCAC CGAATCCTAC
TACTGGGATC TCAACGACAA TACCCGCGCC TTCGCCAAGC GCTTCTCGGA GCAGGCCAAG
AACAACGCCA AGCCGTCGAT GACCCAGGCC GGCGTCTATG CCGCCGTGCT GCACTATCTC
AAGACGCTGG AGGCGATGGG CGGCAATCCG CATGACGGCG CCAAAGTCGT CGCCAAGATG
AAAGAAATCC CGGCCGACGA CACGCCGTTC GGCAAATCGA TCATCCGCGC CGACGGCCGG
CGCATGGTCC CGGCCTTCCT GTTCGAAGTG AAGTCCCCGG CGGAGTCGAA GGCGCCGTGG
GACTACTACA AGAAGATCGC CGACATCTCC GCCGAAGACG CCGCGCGCCC GCTGGCCGAC
AGCGAGTGCC CGCTCGTCAA GAAGTAA
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| Protein sequence | MRVIFSCRRA VAIALAGAAF ASPAFAQDKT AKIGVLNDMS SLYADIGGPN SVVAAKLAIA
DSGLEKKGWK IDLVVGDHQN KPDIGVNVAR QWIDVDKVDM ITDTPNSGVA LAVSNLVKEK
NIILMNSGGA SADLTGKQCT PNTISMTYDT YMLAHGTGQA LTKAGGNTWF FLTADYAFGA
ALERDTTAVV KANGGQVLGG VKHPLNTADF SSFLLQAQAS KAKVIGLANA GGDTTNSIKQ
ASEFGITAGG QKLAALLLFI NDVHSLGLKV AQGLTFTESY YWDLNDNTRA FAKRFSEQAK
NNAKPSMTQA GVYAAVLHYL KTLEAMGGNP HDGAKVVAKM KEIPADDTPF GKSIIRADGR
RMVPAFLFEV KSPAESKAPW DYYKKIADIS AEDAARPLAD SECPLVKK
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