| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2430 |
|---|
| Symbol | |
|---|
| ID | 3909564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 2787014 |
|---|
| End bp | 2788993 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637884329 |
|---|
| Product | myosin-cross-reactive antigen |
|---|
| Protein accession | YP_486046 |
|---|
| Protein GI | 86749550 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4716] Myosin-crossreactive antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.116125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CAGCCCACAC TTCGATCCAC CAGACATCCG GCAAGCACCC GATCGAGGCC
GATGCGGGCG CGGGGTTCTG GCGCAAAGGG CCGGCCGATA CGCTGCCGCC GCCCGACATG
ATGGGCCCCT ACATGCGTAA CCGTCCGGTC CCGGCCGAAC AGGTCGAAGG GCGCAAGGCC
TGGATCATCG GCAGCGGCAT CGCCGGGCTG GCGGCCGCCT TCTACATGAT CCGGGACGGC
GGGATGAAAG GCTGCGACAT CACCATCCTC GATACGATGC AGATCGCCGG CGGCTCGCTC
GACGGCGCCG GCAATGCCGA CGAGGGCTAC ATCATCCGCG GCGGCCGCGA GATGAACTTC
AACTACGACA ATTTCTGGGA CCTGTTTCAG GATGTGCCGG CGTTGGAATT GCCCGAGGGC
TATTCCGTCC TCGACGAATA TCGGCTGGTC AACGACAACG ATCCGAACTG GTCGAAGGCG
CGGCTGATGC ACAAGCAGGG CGAGATCCGC GACTTCTCGA CGCTCGGCCT GAGCAAGCTG
CACCAGTGGG AGATCCTCAA GCTGCTGCTC AAGCGCAAGG AGGACCTCGA CGACATCACC
ATCGAGCAAT ATTTCAGCGC AAGCTTCCTC GAAACCAATT TCTGGTATCT GTGGCGCTCG
ATGTTCGCCT TCGAGAACTG GCAGAGCCTG CTGGAAATGA AGCTCTACAT GCATCGCTTC
CTCGATGCGA TCGACGGGCT GACCGACATG TCGGCTCTGG TATTTCCGAA ATACAATCAG
TACGACAGCT TCGTCGTGCC GCTGACCCGG ATGCTCGAGG GGAAGGGCGT GAAGGTGCAG
TTCGGCACGA GGGCCTATGA TCTCGACATG GTCGAAGAGG CCGGCCGCCG CACCGTGACG
GCGATCCGCT GCAAGAAGGA CGGCAAGGAC GACAGCATCG CCGTCGGGCC GAACGACGTT
GTGTTCGCGC TGACGGGATC GATGACCGAG GGCACGGCCT ATGGCGACAT GGACACCGCC
CCCGTGCTGG CCCGTGGCAA TGCCGAGCCG GGCGACGACA GCGACTGGAT GCTGTGGAAG
AACCTGGCGA AGAAGTCGCC GGTGTTCGGC AAGCCTGAAA AATTCTATGG CAATGTCGCG
GGCTCGATGT GGGAATCGGC GACGCTGACC TGCAAACCCT CACCCCTCAT CGACAAGCTG
AAGCAATTGT CGGTCAACGA TCCGTATTCC GGCAAGACCG CCACCGGCGG AATCATCACC
TTCACCGATT CCAACTGGGT GCTGAGCTTC ACCTGCAATC GCCAGCCGCA TTTTCCGACC
CAGCCCGACG ACGTGCTGGT GCTGTGGGTC TACGCGCTGC TGATGGACAA GGACGGCAAT
CACGTCAAGA AGCCGATGCC GGCCTGCACC GGCCGGGAAA TTCTGGCGGA GCTGTGCTAT
CATCTGGGGA TCGTCGATCA GCTCGACGCG GTCGTGGCCA GCACCAAGGT TCGTCTGGCG
CTGATGCCCT ATATCACCGC GCAATTCATG CCGCGGGCGG CGGGCGATCG CCCGCGCGTC
GTGCCCGAGG GCTGCACCAA CCTGGCGCTG ATGGGGCAAT TCGTCGAGAC CAGCAACGAC
ATCATCTTCA CGATGGAAGC CTCGGTGCGC ACGGCGCGGA TCGGCGTCTA CACGCTGCTG
GGCCTGCCCA AGCAGGTCGC CGATATCAGC CCGACCCAAT ACGACATCCG CAACCTGCTG
AAGGGCGCGC GCGCGATGAA CAACAACGAG CCGTTCCCGG GCGAACGGCT GTTGCATCGC
CTGCTCGACA ACAGCTACTA CGCCCATATC CTGCCGCCGC TGCCGGAGCA CGACGACAGC
TTGCGCGAAC GCGCCGAGGC CGAACTGTCC ACGCTGCTGG GCAAGGGAAG CCAGGCGCTC
GGCGCGGTCG TCGGCTGGCT CGACCGGATG CGGGACGGAC TGAGAGACAC GTCGAAATAA
|
|---|
| Protein sequence | MTEPAHTSIH QTSGKHPIEA DAGAGFWRKG PADTLPPPDM MGPYMRNRPV PAEQVEGRKA
WIIGSGIAGL AAAFYMIRDG GMKGCDITIL DTMQIAGGSL DGAGNADEGY IIRGGREMNF
NYDNFWDLFQ DVPALELPEG YSVLDEYRLV NDNDPNWSKA RLMHKQGEIR DFSTLGLSKL
HQWEILKLLL KRKEDLDDIT IEQYFSASFL ETNFWYLWRS MFAFENWQSL LEMKLYMHRF
LDAIDGLTDM SALVFPKYNQ YDSFVVPLTR MLEGKGVKVQ FGTRAYDLDM VEEAGRRTVT
AIRCKKDGKD DSIAVGPNDV VFALTGSMTE GTAYGDMDTA PVLARGNAEP GDDSDWMLWK
NLAKKSPVFG KPEKFYGNVA GSMWESATLT CKPSPLIDKL KQLSVNDPYS GKTATGGIIT
FTDSNWVLSF TCNRQPHFPT QPDDVLVLWV YALLMDKDGN HVKKPMPACT GREILAELCY
HLGIVDQLDA VVASTKVRLA LMPYITAQFM PRAAGDRPRV VPEGCTNLAL MGQFVETSND
IIFTMEASVR TARIGVYTLL GLPKQVADIS PTQYDIRNLL KGARAMNNNE PFPGERLLHR
LLDNSYYAHI LPPLPEHDDS LRERAEAELS TLLGKGSQAL GAVVGWLDRM RDGLRDTSK
|
|---|
| |