Gene RPB_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2390 
Symbol 
ID3909390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2741873 
End bp2742706 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content63% 
IMG OID637884289 
Producthypothetical protein 
Protein accessionYP_486006 
Protein GI86749510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.325647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG GAATTGCCGT TCTGCTGACG CTGTGCATCG TATCGGCCGC AGCTTATTTC 
ACCGCTTCGA AATGGGCGAT CCGTCACGAG ACGCTGACGT TCTTCGATGC GGCCCGCAAC
CGGCCGGTGG CCGTCGATAT CGCGGTGCGG CGCGACAAGG AGCTGCAGGC CGAGGCCGGC
CTGATCGAAC TGCCGGTCGC GCTCCTCAAT CACGGCAATA CCGTCCGCTT TACCGAGTAC
TCGTTCCTCG CCAATCTGTT CGCCGCGCGC GGCTACATGG CGGTGAGCAT CCAGCACGAT
CTCGACAGCG ACGCGCCGCT GGTGACGAAA GTCGGCGAGC CTTATGTGGG ACGGCTTCCG
GTGTATCAAC GCGGTATCGC CAACATCGAA TTCGCTGTGA AGCAACTCGC CGTATTGCAG
CCGAACGCCG ATTACGAACA CTTGACGATG GTCGGTCATT CGAACGGCGG CGACATTTCG
ATGTACTACG CCAAGCTGCA TCCCGACCGG ATCAGGAAGG TGGTGACGCT GGACAATCTG
CGGGTGCCGT TCATGATCGA TGGCAAGTTC AGAATTCTGT CGTTCCGCTC CCAGGACCCG
GTGTTCAAGC CCGATCCCGG CGTCGTGCCG GACCAGGAGA TCTGCGACAA GGCCGGCATC
ACCGTGGTCA ACACCGGCTT CCAGCATGTC GACATGAGTG ATCGCGGTCC GGACGACGTC
AAGGCGTCGA TCAGCAGCGC GCTGGATCAG TTCCTCGACA CCGAGGGAGT CAGGCCGGGG
CCGGTCAAGG CGCGGCCTGC GCCGAGCTCG GGCGCCATGG CGCAGGTGAG GTGA
 
Protein sequence
MTRGIAVLLT LCIVSAAAYF TASKWAIRHE TLTFFDAARN RPVAVDIAVR RDKELQAEAG 
LIELPVALLN HGNTVRFTEY SFLANLFAAR GYMAVSIQHD LDSDAPLVTK VGEPYVGRLP
VYQRGIANIE FAVKQLAVLQ PNADYEHLTM VGHSNGGDIS MYYAKLHPDR IRKVVTLDNL
RVPFMIDGKF RILSFRSQDP VFKPDPGVVP DQEICDKAGI TVVNTGFQHV DMSDRGPDDV
KASISSALDQ FLDTEGVRPG PVKARPAPSS GAMAQVR