| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2364 |
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| Symbol | |
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| ID | 3909363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2718807 |
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| End bp | 2720270 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884262 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_485980 |
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| Protein GI | 86749484 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.513248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG ACATTCCCCG CCCCGTCATC GTCTGGTTCC GCGACGATCT GCGGCTCTCC
GACCATCCGG CCCTGCACGC AGCTGCGGCC TCCGGCAGCC CGCTGATCTG CATCTACGTC
CATGACGAAC AAAGCCCGCA ACTGCGTCCG CCGCAGGCGC GGCCGATCGG CGGCGCCGCG
CGCTGGTGGT TGGCGCAGTC GTTGCGCGCG CTCGCCGCCG AGCTCGAGCA GCGTGGCGCG
CGACTGATCC TGCGCCGCGG CCCTGCCGCT GCGATCGTCG GTGAACTCGC CCGACAGGTC
GACGCCGCCG CCGTGCATTG GAACGAGATC GAGATCGCAC CGCATCGCGC CATCGCCGAC
GACCTCGCCG AAACGCTGAG CATGTCCGGG ATCGATCACC ACCGCCACCC CGGCGACCTG
TTGGTGGCCC CGTCCGAAAT CCGAACCAAG GACGGCCGCG GCCTGCGCGT GTTCACGCCG
TTCTGGCGCC GCGTCCTCGG CCTCGGCGAT CCACCGAAGC CGTTGCCGGC GCCGGCGATG
CTGCGCGCTG GACCCGACAT TGCAAGCGAC GATCCGGCGA CGTGGCAGCT GGAGCCGACC
GCGCCGGATT GGGCCGGTGG ACTGCGCGCG AGCTGGACGC CGGGGGAACG CGCCGCGCAC
GACCTGCTCA CCGCCTTCCT CGATCGCCTG CCCGGCTATG CCGCGGACCG CGACCGGCCC
GATCGCGACG CCACCTCGCT GCTGTCGCCG CATCTGCGGT TCGGCGAGAT CAGTCCGCGG
CAGCTCTGGT ACGCGGCGCG CTTTGCCGCC GCAAAGCGGC CGGCGATCGC CGCCGACATC
GACAAATTCC TCAGCGAACT CGGCTGGCGC GAGTTCTGCC GGCACCTTCT GCACGACCAC
CCCGATCTCG CCGAGCGCAA TCTGCAATCG GCGTTCGACG CCTTTCCGTG GACGCGCGAC
GATGCGGCGC TCGCCGCCTG GCAGCGCGGA CGCACCGGCT ATCCGATCGT CGACGCCGGG
ATGCGCCAAC TCTGGCACAC CGGCGTGATG CACAATCGCA TCCGTATGGT GGTGGCCTCG
TTCCTGGTGA AGCATCTGCT GATCGACTGG CGGCTCGGCG AAGAATGGTT CTGGGACACG
CTGGTCGACG CCGATCCCGG CAGCAATCCC GGCAATTGGC AGTGGGTCGC CGGCTCCGGC
GCCGACGCCG CGCCGTATTT TCGCGTCTTC AACCCGATCC TGCAGGGCGA GAAGTTCGAT
CCCGCCGGCG ATTATGTGCG CCGCTGGGTG CCGGAGATCG CGGCCCTGCC GAACAAGTTC
ATCCACCAGC CATGGACCGC GACGCTGCTC GAACGCGCCG CGGCGGGCGT TGCGCTCGGC
GGCAATTACC CCGCGCCGAT CGTGGATCAC AAGGTCGGAC GCGCGCGCGC GCTTGCCGCT
TACGCCGAAC TGCGTCAGAG TTGA
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| Protein sequence | MSNDIPRPVI VWFRDDLRLS DHPALHAAAA SGSPLICIYV HDEQSPQLRP PQARPIGGAA
RWWLAQSLRA LAAELEQRGA RLILRRGPAA AIVGELARQV DAAAVHWNEI EIAPHRAIAD
DLAETLSMSG IDHHRHPGDL LVAPSEIRTK DGRGLRVFTP FWRRVLGLGD PPKPLPAPAM
LRAGPDIASD DPATWQLEPT APDWAGGLRA SWTPGERAAH DLLTAFLDRL PGYAADRDRP
DRDATSLLSP HLRFGEISPR QLWYAARFAA AKRPAIAADI DKFLSELGWR EFCRHLLHDH
PDLAERNLQS AFDAFPWTRD DAALAAWQRG RTGYPIVDAG MRQLWHTGVM HNRIRMVVAS
FLVKHLLIDW RLGEEWFWDT LVDADPGSNP GNWQWVAGSG ADAAPYFRVF NPILQGEKFD
PAGDYVRRWV PEIAALPNKF IHQPWTATLL ERAAAGVALG GNYPAPIVDH KVGRARALAA
YAELRQS
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