| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2356 |
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| Symbol | |
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| ID | 3909354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2707866 |
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| End bp | 2710568 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884253 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_485972 |
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| Protein GI | 86749476 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0113546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.244783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACG CCATTGCAGC GTTCATCCAG AGCGTGAGGT CGCGCACGCT TTCGATCGGA
CAGATGACGT TCGGCAGCTT CCTGTTGCTG CTGACCATCA TCGCCATGAC CAGCATCGGC
AGCGTGGTCG CGATCCGTCA TATCGACGCC ACCTTCGCCG AATTGCAGCG GCTGCAAAGT
GTCGGCGATC TCGCCGAGGA GATCGAGCGC CGGATGAGCG ATCTCCGCTT TGCGGCGCGC
CAGGTCGTCA GCGAACCGAG CGCGCAGCCG GCCGGGCGGG TGTTCGAGGC CGCCTCGACC
CTGACCGCGC TATTGAAGAA GACGCGGCTC GAGCTCGATG CCGATCAGCG CGAGATGATC
GACGGCGTCA CCGATCGGCT CACCAATTAT CGCGACGGGC TGGAGCGGAT CACCGCGCTG
ATGCCGCGGC GGGCGGACAT GGTCGCCACC GTCCCGCCGC TGCGCGAGGC GTTCGAGGCG
GTGGTGGTCG GGCTGCAGGA CCGTTCGCTG GCGGCGGCGC TGCACGGCGA GCACAGCAAG
ATCGCCGCTG CGCTGCTGTC GCGCGATCTG ATCGGCGCGG GGGAGGCGGC GCAGCGGATG
CGCGCGATCC CGATCGGAGA TGTCGCCGCC GCGACCGCGG TGCGCGACTA TGCCGACGTG
ATCATCTCGA CCACGGCGGT CGAGCACGAG ATCGCATCGC TCGATCGCAA CGTGCTCGGT
GCGGAAGGAC GGTCGATCGC GCGTGTCACC GAGCTGCTGC GTGATGTCGC CGCGCGGCGG
GGCAGGGTGC TGTCGCGCGA TCTCGCCCGG ACGCTCACCG AGGACAAGTG GCAGAGCATC
GTGCTCGGCT CCGCCGGCGT GCTCGTCGGC CTGTTGGCGG CGGCGTTCGT CGTGCGCCGC
ACCGTCGGTC CGCTCACCGC GATCACCAAG GCGATCCGCC AGCTCGCGGC CGGCCAGCAA
TACACCGCGA TTCCGGCGAT CGAACTCAAG AACGAGATCG GCGACATCGC CCGCGCGGCG
GAAGTGTTCC GTCGCACGCT GGTCGAGGCC GACAGCGCGC GCGAGGCAGC GGTGCGGGCG
CTCGCCGAAC AGCGCCTCGC CGAGGAGAGC TACCGCAAGC TGTTCGAAGG CTCGATCGAC
GGCATCTATG TGACGACGCC GGACGGCGCG CTGCTGAACG CCAATCCGGC GCTGGCGCGG
ATGATGGGCT ACGACGATCC GGCCGACCTG ATGCGCGCCA CCGGCGACGT CTCCAACTCG
ATCTATCTCG ATCCGCGCAA GCGCGACGCC TATCGCGCGC TGATGCAGCG CGACGGCATG
GTGCGCGAGT TCGAGTATCA GGCGCTCAAG CGCAACGGCG ACGTGCTGTG GCTGTCGGAC
AGCGCCAGCG CGGTGCGCGA CGAGACCGGC GCGGTGATCC GCTACGAGGG CGCCGTCCGC
GACATCACCG ACCAGAAGCG TGCGGAGACC GCGGTCGCCG AGGGGCGCCG CCTGCTGCAA
CAGGTGATCG ACACCGTTCC GGCGGTGATC AACGTCAAGG ACACCGAGCT TCGCTATCTG
TTGATGAACC GCTACATGGC GACGATCTTC GGCATCGATC CGAACGACGC GATCGGCCGC
ACCACCGCCG ACCTGATGTC GCGCTACGGC TCGCACAAGA CCGACGCCAA CGACAAGAAG
GTGCTGGCGA CCGGCGAGGG ACTCGGCTTC TACGAAGAAG AATATCAGGA CGCCACCGGC
GCGATGCGGC AATGGCTGGT CAACAAGATG CCGCTGAAGG ATTCGCAAGG GAATATCGAG
CGGATCGTCA CGGTCGCGCT CGATATCGGC GAGCGCAAGC GCGGCGAACT GGAAATGCGC
AAGGCCAAGG ATGCCGCCGA GGCGGCGCTG CGCAATCTGC GCGAGACCCA GCAATCGCTG
ATCGAGGCGG AAAAGCTCGC CGCCCTCGGA CGTCTGGTCG CGGGCGTCGC CCACGAGGTC
AACAATCCGG TCGGGATCAG CCTCACGGTC GCCTCCGCGC TGGAGCGCAA GACCTCGGTA
TTCGCCGCCG AAGTCGAGCG CGGCGATCTC AAACGCTCGC GGCTCAACGA ATTCCTCGCC
ACCAGCCGCG ATGCGGCCTC GCAGCTCGTC GCCAATCTCA ACCGCGCCGC CGAGCTGATC
CAGTCGTTCA AGCAGGTCGC GGCCGACCGC AACTATTCGG ATCAGCGGCC GTTCGATCTC
GGCGACCTGA CCGAGCAGGT GGTGATGAGT CTGCGGCCGG GCCTGCGTAA GCACAATCTG
ACGCTGGATG TCGATTGCCA GCCCGGTCTG ACGATGAATT CCTATCCCGG CCCCTACGGT
CAGGTACTGA CCAACCTGTT TCTAAACTCG GTGGCGCACG CATTTCCGAA TGGCCGCCCC
GGCACGGTGG AGATCAAGGT CCGTGCCTCC GGCAAGGACA ATGTCGAGGT GATCTACGCC
GACGACGGCT GCGGCATGAG TCTGGATGTG CGCAGGCGGG CGTTCGACCC GTTCTTCACC
ACGCGGCGGG ATCAGGGTGG CACCGGGCTC GGCCTGCATA TCGTCTACAG CATCGTCACC
AACCGCCTCG GCGGCCGGCT CGATCTCGAT TCCGCGCCGG GCAACGGCAC GCGCATCCAG
ATGATCCTGC CGCGCGTCGC GCCGCGCGAC GTGGTGGACG AGCCGATGAC CGCGCAGGCC
TGA
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| Protein sequence | MPNAIAAFIQ SVRSRTLSIG QMTFGSFLLL LTIIAMTSIG SVVAIRHIDA TFAELQRLQS
VGDLAEEIER RMSDLRFAAR QVVSEPSAQP AGRVFEAAST LTALLKKTRL ELDADQREMI
DGVTDRLTNY RDGLERITAL MPRRADMVAT VPPLREAFEA VVVGLQDRSL AAALHGEHSK
IAAALLSRDL IGAGEAAQRM RAIPIGDVAA ATAVRDYADV IISTTAVEHE IASLDRNVLG
AEGRSIARVT ELLRDVAARR GRVLSRDLAR TLTEDKWQSI VLGSAGVLVG LLAAAFVVRR
TVGPLTAITK AIRQLAAGQQ YTAIPAIELK NEIGDIARAA EVFRRTLVEA DSAREAAVRA
LAEQRLAEES YRKLFEGSID GIYVTTPDGA LLNANPALAR MMGYDDPADL MRATGDVSNS
IYLDPRKRDA YRALMQRDGM VREFEYQALK RNGDVLWLSD SASAVRDETG AVIRYEGAVR
DITDQKRAET AVAEGRRLLQ QVIDTVPAVI NVKDTELRYL LMNRYMATIF GIDPNDAIGR
TTADLMSRYG SHKTDANDKK VLATGEGLGF YEEEYQDATG AMRQWLVNKM PLKDSQGNIE
RIVTVALDIG ERKRGELEMR KAKDAAEAAL RNLRETQQSL IEAEKLAALG RLVAGVAHEV
NNPVGISLTV ASALERKTSV FAAEVERGDL KRSRLNEFLA TSRDAASQLV ANLNRAAELI
QSFKQVAADR NYSDQRPFDL GDLTEQVVMS LRPGLRKHNL TLDVDCQPGL TMNSYPGPYG
QVLTNLFLNS VAHAFPNGRP GTVEIKVRAS GKDNVEVIYA DDGCGMSLDV RRRAFDPFFT
TRRDQGGTGL GLHIVYSIVT NRLGGRLDLD SAPGNGTRIQ MILPRVAPRD VVDEPMTAQA
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