Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2354 |
Symbol | |
ID | 3909352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2704536 |
End bp | 2705330 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884251 |
Product | NUDIX hydrolase |
Protein accession | YP_485970 |
Protein GI | 86749474 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.081221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.303498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCG AAACCCCGGT CGCGCGTCCC GCGTCCACCA TCATGCTGCT GCGCGACCGT CCGGACACCT TCGACGTCTT CATGATGGTG CGGCACTATC AGATCGAGTT CGCTTCGGGT GCGCTGGTCT TCCCCGGCGG CAGCGTCGAT GCCGGGGATC GCGACATCAT CGGCCGGCCG GAGCTGTATT GTTGCGCGGA CGCCACCGCC GAACCGGCGC TGGATTTCCA GATCGCGGCG ATTCGCGAGA CTTTCGAGGA GAGCGGCATC CTGCTGGCGC GTCCGCTCGG CAGCGATCAA CTCGTTGCGG CGTCCCGCGC CGCCGAGATC GAGGCCTTGC ACCGCACCGC ACTGTGCGAG AGCAGGATCT CGTTCGCGCA GATCCTCGCC GATCACGACC TGGTGCTGGC GCTCGATCTG CTGGTGCCTT ATGCGCGCTG GATCACGCCG GAGAAATTGC CGAAGCGTTT CGACACCTGG TTCTTCCTCG CCGAAGCGCC GCCCGAACAG CTCGGCATGC ACGACGGCAA GGAGTCGACC GATTCGATCT GGCTGTCGCC GCAGGAGGCG TTGGACGGCG GCGACAGCGG ACGCTTCACG CTGCCGTTTC CGACGACGCG CAACCTGATC CGGCTCGGCA AGCAGCCCAA CGTCCGGCAG GCGCTCGCCG ACAGTCGCGG CAAACCCATC GTGACGGTGA TGCCGATCAT GAGCCGCGAC GGCGACAAGA GAACACTGCG GATTCCGGCC GAGGCCGGTT ACGACGGCGA AGTGTTCGAG TTCACCGGCA GTTAG
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Protein sequence | MSSETPVARP ASTIMLLRDR PDTFDVFMMV RHYQIEFASG ALVFPGGSVD AGDRDIIGRP ELYCCADATA EPALDFQIAA IRETFEESGI LLARPLGSDQ LVAASRAAEI EALHRTALCE SRISFAQILA DHDLVLALDL LVPYARWITP EKLPKRFDTW FFLAEAPPEQ LGMHDGKEST DSIWLSPQEA LDGGDSGRFT LPFPTTRNLI RLGKQPNVRQ ALADSRGKPI VTVMPIMSRD GDKRTLRIPA EAGYDGEVFE FTGS
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