Gene RPB_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2354 
Symbol 
ID3909352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2704536 
End bp2705330 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID637884251 
ProductNUDIX hydrolase 
Protein accessionYP_485970 
Protein GI86749474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.081221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.303498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCG AAACCCCGGT CGCGCGTCCC GCGTCCACCA TCATGCTGCT GCGCGACCGT 
CCGGACACCT TCGACGTCTT CATGATGGTG CGGCACTATC AGATCGAGTT CGCTTCGGGT
GCGCTGGTCT TCCCCGGCGG CAGCGTCGAT GCCGGGGATC GCGACATCAT CGGCCGGCCG
GAGCTGTATT GTTGCGCGGA CGCCACCGCC GAACCGGCGC TGGATTTCCA GATCGCGGCG
ATTCGCGAGA CTTTCGAGGA GAGCGGCATC CTGCTGGCGC GTCCGCTCGG CAGCGATCAA
CTCGTTGCGG CGTCCCGCGC CGCCGAGATC GAGGCCTTGC ACCGCACCGC ACTGTGCGAG
AGCAGGATCT CGTTCGCGCA GATCCTCGCC GATCACGACC TGGTGCTGGC GCTCGATCTG
CTGGTGCCTT ATGCGCGCTG GATCACGCCG GAGAAATTGC CGAAGCGTTT CGACACCTGG
TTCTTCCTCG CCGAAGCGCC GCCCGAACAG CTCGGCATGC ACGACGGCAA GGAGTCGACC
GATTCGATCT GGCTGTCGCC GCAGGAGGCG TTGGACGGCG GCGACAGCGG ACGCTTCACG
CTGCCGTTTC CGACGACGCG CAACCTGATC CGGCTCGGCA AGCAGCCCAA CGTCCGGCAG
GCGCTCGCCG ACAGTCGCGG CAAACCCATC GTGACGGTGA TGCCGATCAT GAGCCGCGAC
GGCGACAAGA GAACACTGCG GATTCCGGCC GAGGCCGGTT ACGACGGCGA AGTGTTCGAG
TTCACCGGCA GTTAG
 
Protein sequence
MSSETPVARP ASTIMLLRDR PDTFDVFMMV RHYQIEFASG ALVFPGGSVD AGDRDIIGRP 
ELYCCADATA EPALDFQIAA IRETFEESGI LLARPLGSDQ LVAASRAAEI EALHRTALCE
SRISFAQILA DHDLVLALDL LVPYARWITP EKLPKRFDTW FFLAEAPPEQ LGMHDGKEST
DSIWLSPQEA LDGGDSGRFT LPFPTTRNLI RLGKQPNVRQ ALADSRGKPI VTVMPIMSRD
GDKRTLRIPA EAGYDGEVFE FTGS