Gene RPB_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2325 
Symbol 
ID3908956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2674527 
End bp2675231 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content68% 
IMG OID637884222 
Productnitroreductase 
Protein accessionYP_485941 
Protein GI86749445 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.278176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.241368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCG ATGACGTCGT CCTCGGTCGC CGCAGCATTC GCGGATACAA GCCCGATCCC 
GTGCCGAAAC AGTTGATCGA GGAAATCCTG ACGCTGGCGA TGCGCGCGCC GTCGTCGATG
AACACCCAGC CGTGGAATTT CTATGTCATC ACCGGCGAGC CGCTGAACCG GATCCGCGCC
GGCAACACCG AGCGCAATCT GGCCGGCGTG CCGCACAGCC GCGAATTCCG CATTGGGCAG
CCGTTCGCGG GCGCGCATCG CGACCGCCAG GTCGGCGTCG CCAAGCAGCT GTTCAGCGCG
ATGGGAATCG CGCGCGACGA CAAGGACGCG CGGCAGGACT GGGTGCTGCG CGGCTTCCGC
CAGTTCGACG CACCGGTGTG CATCATCGTC ACCTACGACC GCGTGCTCGA CGGCAGCGAC
GACACGCCGT TCGATTGCGG CGCGGTGACG ACCGCGCTGG TCAACGCCGC CTGGTCGCGC
GGGCTCGGCT GCGTCATCAA CAGCCAGGGC ATCATGCAGT CGCCGGTGGT GCGCGAACAC
GCCGGCATCG CCGACGATCA GATCATCATG AAGGCGATCG CGCTCGGCTG GCCGGACGAG
ACGTTTCCCG CCAACGCGGT GGTGTCGGAG CGCAAGCCGG TCAGCGAAGC GGCGGTGTTC
GTCGGGTTCG ACGAAGAGCC GGCCGCGAAG CGGCAGGCGG GGTAG
 
Protein sequence
MQFDDVVLGR RSIRGYKPDP VPKQLIEEIL TLAMRAPSSM NTQPWNFYVI TGEPLNRIRA 
GNTERNLAGV PHSREFRIGQ PFAGAHRDRQ VGVAKQLFSA MGIARDDKDA RQDWVLRGFR
QFDAPVCIIV TYDRVLDGSD DTPFDCGAVT TALVNAAWSR GLGCVINSQG IMQSPVVREH
AGIADDQIIM KAIALGWPDE TFPANAVVSE RKPVSEAAVF VGFDEEPAAK RQAG