Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2325 |
Symbol | |
ID | 3908956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2674527 |
End bp | 2675231 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884222 |
Product | nitroreductase |
Protein accession | YP_485941 |
Protein GI | 86749445 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.278176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.241368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCG ATGACGTCGT CCTCGGTCGC CGCAGCATTC GCGGATACAA GCCCGATCCC GTGCCGAAAC AGTTGATCGA GGAAATCCTG ACGCTGGCGA TGCGCGCGCC GTCGTCGATG AACACCCAGC CGTGGAATTT CTATGTCATC ACCGGCGAGC CGCTGAACCG GATCCGCGCC GGCAACACCG AGCGCAATCT GGCCGGCGTG CCGCACAGCC GCGAATTCCG CATTGGGCAG CCGTTCGCGG GCGCGCATCG CGACCGCCAG GTCGGCGTCG CCAAGCAGCT GTTCAGCGCG ATGGGAATCG CGCGCGACGA CAAGGACGCG CGGCAGGACT GGGTGCTGCG CGGCTTCCGC CAGTTCGACG CACCGGTGTG CATCATCGTC ACCTACGACC GCGTGCTCGA CGGCAGCGAC GACACGCCGT TCGATTGCGG CGCGGTGACG ACCGCGCTGG TCAACGCCGC CTGGTCGCGC GGGCTCGGCT GCGTCATCAA CAGCCAGGGC ATCATGCAGT CGCCGGTGGT GCGCGAACAC GCCGGCATCG CCGACGATCA GATCATCATG AAGGCGATCG CGCTCGGCTG GCCGGACGAG ACGTTTCCCG CCAACGCGGT GGTGTCGGAG CGCAAGCCGG TCAGCGAAGC GGCGGTGTTC GTCGGGTTCG ACGAAGAGCC GGCCGCGAAG CGGCAGGCGG GGTAG
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Protein sequence | MQFDDVVLGR RSIRGYKPDP VPKQLIEEIL TLAMRAPSSM NTQPWNFYVI TGEPLNRIRA GNTERNLAGV PHSREFRIGQ PFAGAHRDRQ VGVAKQLFSA MGIARDDKDA RQDWVLRGFR QFDAPVCIIV TYDRVLDGSD DTPFDCGAVT TALVNAAWSR GLGCVINSQG IMQSPVVREH AGIADDQIIM KAIALGWPDE TFPANAVVSE RKPVSEAAVF VGFDEEPAAK RQAG
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