Gene RPB_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2274 
Symbol 
ID3909655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2624513 
End bp2625226 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID637884171 
ProductABC transporter related 
Protein accessionYP_485890 
Protein GI86749394 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.631731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.801014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAG CACGTCTTGA AGTCGAGCGC CTGAGCGCCG GCTATGGTTC AGTCGGCATC 
CTGAGCGAGA TGAGTCTGGT CGTGCCGGCC GGCGGCCGAT TGACCGTGCT CGGGCGCAAC
GGCGTCGGCA AGACCACGCT GCTCGCCACG ATCATGGGCC TGACGTCGCA CCAGGGCGGT
GTGATCCGCG TCGACGATCG CGATGTGACG GGACTGAAGA CCTACGCCCG TGCCGCCGCG
GGCCTCGGCT ACGTGCCGCA GACGCGCGAC GTGTTCCGGT CGCTGACGGT CGAGGAAAAT
CTCTTCACCG GCCTCAAGGG CCGGCCGCGC TCCGAGCTCG ACGAGGTCTA CACGATTTTT
CCGCGGCTCG CCGAGCGGCG GCATCACAAC GGCGCCCAAT TGTCGGGCGG CGAGCAGCAG
ATGCTGTCGC TGGCGCGCAC GCTGCTGGGC AAGCCGTCGG TGCTGCTGCT GGACGAACCG
CTCGAAGGGC TCGCCCCGGT GATTTGCGAC CGGTTGATGG AAACGATCGT CGACCTGGCG
CAGTCCGGAG AAATGACCGT GGTTCTGGTC GAGCAGCAGA TCGAGCGGGC GCTCGATTTC
GCCGACGACG TGATCGTCAT CGAGCGTGGC CGGATCGCCT GGAGCGGGCG GACCGAACGC
CTGCGTGGCG AGCGGGAACT GGTCGACGCC CTGCTCGGCG TCGGGATCGG GTGA
 
Protein sequence
MPAARLEVER LSAGYGSVGI LSEMSLVVPA GGRLTVLGRN GVGKTTLLAT IMGLTSHQGG 
VIRVDDRDVT GLKTYARAAA GLGYVPQTRD VFRSLTVEEN LFTGLKGRPR SELDEVYTIF
PRLAERRHHN GAQLSGGEQQ MLSLARTLLG KPSVLLLDEP LEGLAPVICD RLMETIVDLA
QSGEMTVVLV EQQIERALDF ADDVIVIERG RIAWSGRTER LRGERELVDA LLGVGIG