| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2237 |
|---|
| Symbol | |
|---|
| ID | 3909020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2561611 |
|---|
| End bp | 2562297 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637884132 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_485853 |
|---|
| Protein GI | 86749357 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA CCGCCAACAG CGAGCAATGC CCCTTGAGCA CCACCGACAA GACGCCTCCG
CCGCAGTCTG CTGCGCCCCG CGGGCGCCCG AAGTTGCAAT CCGACGAGGA GCAGCGCGCG
CGGATTGCCG ACTGCGCGAT GCGGCTGTTT CTGAAGAAGG GCTACGGCCG CACCACGACG
GAAGATATTG CCGCGCATTG CAGGATCTCC AAGCAGACGC TGTATCGACT GTTTCCGGGC
AAGCCGGCAT TGTTCGCGAC GATCGTCGAT CGCCACCGGC ACAGCATGCT CGCCTTGCCG
GGCGACTACG ATGCTCTGCC ACTGGACCTG GCGCTGGAGC GGATCTTCAA CATCGACATC
GAGCCAGCAG CGCACGACGA GCGCATGGCT CTGGTCAGGC TCGTGATGGT CGAGGCCCAT
CAATACCCCG AACTGAACGA GATCCTGCGC CGACACGGCG CCGAGCGATC CCATGCCGAG
CTGGCGGGAT GGTTGAAGCG TCGATCGAAG CAGGAGGCCA TCGACATCGG CGACGCAATG
CACTCGGCCT GGCTGCTCAT GGACATGATG TTCGGCGCAT TGGCCTTCAA GCCTTTCAAC
GAATCGAGCC AATCGCGGAC TGTCGACCTC GCCAGACACA TTCGACGCTT CATCTCGGTG
TTTCTCAACG GTATCCGTCC ACGCTGA
|
|---|
| Protein sequence | MATTANSEQC PLSTTDKTPP PQSAAPRGRP KLQSDEEQRA RIADCAMRLF LKKGYGRTTT
EDIAAHCRIS KQTLYRLFPG KPALFATIVD RHRHSMLALP GDYDALPLDL ALERIFNIDI
EPAAHDERMA LVRLVMVEAH QYPELNEILR RHGAERSHAE LAGWLKRRSK QEAIDIGDAM
HSAWLLMDMM FGALAFKPFN ESSQSRTVDL ARHIRRFISV FLNGIRPR
|
|---|
| |