| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2229 |
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| Symbol | |
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| ID | 3909012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2541986 |
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| End bp | 2542777 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884124 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_485845 |
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| Protein GI | 86749349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.486659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCGGG CTGAAAATCG ACGCAAGCGA TTGCGCATAT ACGGCGTCGC CGCAGCGGCG
CTCGGCGTCC TGATCGTCGT TTCGGCCCGC GCTGAGCCAG TCGCATCGGC TGCGGCCGGG
ACATCGGCGA CGGGTGCCGC CAGCGCGCCC AATTCAGCCG CAGCCAGAGT GGCCGCGGCG
GAAGCGCCGC CGGCGCTGGT GACATCGGGG GCAACCGCTG CGGCCGTCCG GCTGAACGGC
AACTCGGCGT ATCGCGCGCT GATTGTCAGG GAGGCCGAGC GGCACGGTCT CGCGCCGGCA
ATCGCCGAGG CAGTGATGCA CGTCGAGAGC GGCTTCAATC CCGACGCCGT CGGCAGTTCC
GGTGAGATCG GATTGATGCA AGTCATGCCG CCGACCGCGC GAATGCTCGG CTTCGCCGGG
AGCAATGCCG AACTCGCGGT TCCGGAAACC AACATCAAAT ACGGCGTGAC CTATTTGGCG
CAGGCGTGGC GCCTCGCCGG TGGTGATATC TGCACCGCGA CGATGAAGTA TCGCGCCGGC
CATGGTGAGA CGCGGTTCTC TCAGCTGTCC GTCCAGTATT GCGTTGCGGT GCGCGCCAAA
TTGGCTGCGC TCGGGTTTCC GGTGACGGGT CAGGTCCCGG TCGCAACCTT CGGTGCCCCG
GGTAGGGGTG GGATCGGCGC AGGCAACTGC GGGCGTCGCT GTTTGGCGGG GAACACGATC
GGACGCGTCA ACCTCGCCGC GCTGAACGCG CAAATGAATA CGCTGGTGGT GCAGGTCCGC
GCCGGGAGGT GA
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| Protein sequence | MNRAENRRKR LRIYGVAAAA LGVLIVVSAR AEPVASAAAG TSATGAASAP NSAAARVAAA
EAPPALVTSG ATAAAVRLNG NSAYRALIVR EAERHGLAPA IAEAVMHVES GFNPDAVGSS
GEIGLMQVMP PTARMLGFAG SNAELAVPET NIKYGVTYLA QAWRLAGGDI CTATMKYRAG
HGETRFSQLS VQYCVAVRAK LAALGFPVTG QVPVATFGAP GRGGIGAGNC GRRCLAGNTI
GRVNLAALNA QMNTLVVQVR AGR
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