| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2217 |
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| Symbol | |
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| ID | 3907959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2529965 |
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| End bp | 2530516 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637884112 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_485833 |
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| Protein GI | 86749337 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.10129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.130898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTCGATC GCAACAGTAA ATCGCTCCGT GAGGCACTGG CGGCAGACTA TCAGGGACTT
GCGAAACGGC TGACCCGCTG TTTGGGCTCT GCCGACGTCG CCCACGAAAC GCTGCATGAG
ACCTTCCTCA AGGTAGATCG GGTCTCGGAC GCCGTGGAAA TCCGCAGTCC GGTGGATTAT
CTGTTTCGCA TCGCCCTCAA TGTTGCCAAA GATCGCAACA AGAAGGATCG GCATCTGCTG
AGCGCCGGTG AGGTCGCCGC GATCATGGAC GTTGTCGATG ATCGGCCCGA TCCGGCGATT
GTGGCTGAAT CTCGCATGGA GATCGCCGAG TTCCAGAAAG CGCTCGGCGA ATTGCCGCAG
CGTCGGCGTG AGGTTTTCAT CGCTGCTCAT CTCGAGCAGA TCCCGCATCG TGATATTGCC
CAACGTTTCG GAATCAATAT TCGGACTGTC GAATTCGACA TTCAGCACGC CATGGAGTAT
TTGAGCCGCC GACTAGGCCG CCGGGTGGTT CGTCGCTACG GTCCCCGCCC GAAACCGCGA
GCGGTCGACT AG
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| Protein sequence | MFDRNSKSLR EALAADYQGL AKRLTRCLGS ADVAHETLHE TFLKVDRVSD AVEIRSPVDY
LFRIALNVAK DRNKKDRHLL SAGEVAAIMD VVDDRPDPAI VAESRMEIAE FQKALGELPQ
RRREVFIAAH LEQIPHRDIA QRFGINIRTV EFDIQHAMEY LSRRLGRRVV RRYGPRPKPR
AVD
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