| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2195 |
|---|
| Symbol | |
|---|
| ID | 3907935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2488020 |
|---|
| End bp | 2489195 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637884088 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485811 |
|---|
| Protein GI | 86749315 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.175958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0733507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATG ATAATGATGA CTGCGAAGAG CAGCTCACTT TTTTTACGAC AGAGAAACCG
CACCGTACGC AACGAGAGAT CGAAGCCGCA GAGAGCCAAA TTGTCGCCCA GTTGCGAGAC
GTACGATACG TAGTTCGCGA ATATCCGATC GAAGTCGTAG TTCAAATGTA CCTAAGCGGT
AGAAGCGAAG ATCGCAACGA AATATATGTG CCAGACTATC AACGAGACCT AATCTGGTCG
GAGAGACACA AATCTCGCTT CGTCGAGTCC CTTTTGATTG GACTCCCGAT CCCTTTTCTT
TTCGTTGCAG ACGTCGGGGA CGAAGAAGAT CCAGACAAAG CTGGCAGACT AGAAATCGTT
GACGGCGTCC AACGCATTCG AACCCTTGCG GAATTCCTAA CCGGCAGGCT AACACTAAGT
TGTCTTGATC GCCTTGATCG TCTGAACGGT TTTCGTTTCA ATGATCTTCC AATTTCCAGA
CAGCGACGCT TCCGCAGAGC TACACTCAGA TTGATTGAAC TGACAGAGGC CGTTACCGAA
GACGTGCGTC GTGAGATGTT CGACCGGATC AATAGCGGAT CAGTCAACCT AAAAGCGGTC
GAAGTCAGAA GGGGGATGCA ACGCGGCCCA TTTCTTGATC TTGTTACCGA ACTCGCGGCA
GCCCCCCTCC TACACCAACT AGCGCCAATT TCGGACGGAC TTCGAAAGCG ATTTGAGTAT
GAAGAATTAG TCACTCGCTT TTTCGCATTT CTTTACCGTT ACGAAGACTA CGGGAAAGGA
GGAAAGGTCG TCTCCGAATT CTTGCTCAAC TATGTACGCG ACACGAACAA GAAATTAAGC
TCTCCAGAAG GCGACAGAAT TGCTGAAGAA ATGAAGCGCC AATGGCACGA AATGCTAGAG
GTAGTACGAG GCTATTTCCC CGACGGCTTC AAGAAGCGCG GCCCCGGCCG CAAGGTTCCT
CGGGTACGTT TCGAGGCAAT CGCAGTGGGC ATCGGATTAG CGATAAGAGC ACTTAAGGAC
GACGGAGACA GCTTTAAGAT TCTCCACATA GACAACATTG ATGAATGGCT TGAAAGTGAC
GAATTCAAAG AATGGACCAC CAGTGACGCC TCGAACAACA AATCGAATCT TGTAGGACGC
CTCGAATTTG TCCGTAACAA AATGCTAGGC CGATGA
|
|---|
| Protein sequence | MANDNDDCEE QLTFFTTEKP HRTQREIEAA ESQIVAQLRD VRYVVREYPI EVVVQMYLSG
RSEDRNEIYV PDYQRDLIWS ERHKSRFVES LLIGLPIPFL FVADVGDEED PDKAGRLEIV
DGVQRIRTLA EFLTGRLTLS CLDRLDRLNG FRFNDLPISR QRRFRRATLR LIELTEAVTE
DVRREMFDRI NSGSVNLKAV EVRRGMQRGP FLDLVTELAA APLLHQLAPI SDGLRKRFEY
EELVTRFFAF LYRYEDYGKG GKVVSEFLLN YVRDTNKKLS SPEGDRIAEE MKRQWHEMLE
VVRGYFPDGF KKRGPGRKVP RVRFEAIAVG IGLAIRALKD DGDSFKILHI DNIDEWLESD
EFKEWTTSDA SNNKSNLVGR LEFVRNKMLG R
|
|---|
| |