Gene RPB_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2186 
Symbol 
ID3909966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2479243 
End bp2480376 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content69% 
IMG OID637884080 
Producthypothetical protein 
Protein accessionYP_485803 
Protein GI86749307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.769638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0774004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCG AAATCGCCAG TTCCGCGGTC AGCCTCGTCG ATCCGGCGCG GGCGAAGATT 
GCCGGCGCGA TCAAGCAGGC CTCGGGCTCG ACCGGCGCCA GCTTCGAATA TCTGCTCACC
ACCGCCAAGA TGGAATCGAA CTTCAATCCG CAGGCCGCGG CCTCGACCTC CTCGGCGAAG
GGACTGTTCC AGTTCATCGA CCAGACCTGG CTCGGCACCG TGAAAGAGGC CGGCGGCCAG
CTCGGCTATG GCGACTATGC GGATGCGATC AGCAAATCGG CGTCCGGGAG CTACTCCGTC
AGCGATCCGG CGACGCGCCA GGCGATCATG GATCTGCGCA ACGATCCGGT GGTGAGTTCG
GCGATGGCCG GCGCGCTGAC GCAGTCCAAC AGCTTCAAGC TGACCGGCGC GCTCGGCCGG
CGGCCGTCCG ACTCCGAACT CTACATGGCG CATTTCATGG GCGTCGGCGG CGCGTCCAAA
CTGATCAGCG CCGCGCAGGA CACGCCCAAC GCCAGCGCCG CGGCGATGTT TCCCAACGCC
GCCGCCGCCA ACCAGTCGAT CTTCTACGAC CGCTCGGGCA ACGCCCGCAG CGTGGCGCAG
GTCTACGACA ATCTGAACAG CCGCTACAAT GCGGCGGCGA ATTCGTCCGC GACGCAGACC
GCGCTGGCCT CGGCCGGCGG GACCGCCTCC GTCAGTGGTG CGGCGATGGT GCTGGCCTCC
GCGCGGTCGG TCGACAACGC CGCCTATCTG TCGAGCTTCC CCGACGCCCG CACCGTCGAG
GCGGTCGGCG CGGTGTCGTC GGTCGATGCG ACGGCGTCGT CGACCCGACA GTCCGCCGAG
CCGATGTTCC GCACGCTGTT TCTCGGCGGC GACCGCAGCG AGCCGGTGTC GCCGGCGGTG
CGCGAATTGT GGAGCAACGC CACCGGCGCA TCGAGCACCT CGACCGACGC CGCCTCGCGC
GCGGCGACGT CGGGCGCCTC CAGCACCACG ATGTCCTACG CGCCGGCCGC CGCGACCGCG
CCGACCGATT TCGGCCTGGT GGATCCATCC GCCGCGCTGT CCACCACCCC CAATATCCGC
CCGCCGCGCA CCCTCGATTT GTTCAGCGAC CGCAACGGTA CCTACGCGAG CTGA
 
Protein sequence
MSAEIASSAV SLVDPARAKI AGAIKQASGS TGASFEYLLT TAKMESNFNP QAAASTSSAK 
GLFQFIDQTW LGTVKEAGGQ LGYGDYADAI SKSASGSYSV SDPATRQAIM DLRNDPVVSS
AMAGALTQSN SFKLTGALGR RPSDSELYMA HFMGVGGASK LISAAQDTPN ASAAAMFPNA
AAANQSIFYD RSGNARSVAQ VYDNLNSRYN AAANSSATQT ALASAGGTAS VSGAAMVLAS
ARSVDNAAYL SSFPDARTVE AVGAVSSVDA TASSTRQSAE PMFRTLFLGG DRSEPVSPAV
RELWSNATGA SSTSTDAASR AATSGASSTT MSYAPAAATA PTDFGLVDPS AALSTTPNIR
PPRTLDLFSD RNGTYAS