Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2182 |
Symbol | |
ID | 3909962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2475944 |
End bp | 2476864 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637884076 |
Product | hypothetical protein |
Protein accession | YP_485799 |
Protein GI | 86749303 |
COG category | [S] Function unknown |
COG ID | [COG3904] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.172075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0204408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCCG CTGTTCTGTC CCGCTTCGCC AGATCGACGC TCACACGCGT CGCCGCGCTC GGCTTTGTGC TGCTCGGCGC CGCGGCGGGG CCGACGCCAT CGGCGCAGGC CGGCGGCAGC CTCGAGCAGC GTAAGCTTCC GATGCGGTTC GACTGGGTCG CCTGCGAGCC GAACTGCACC GGCTGGATCA GCGCGGTCGG CATCGTCACC GCCGACACCC CGAAGGAGTT CGACGAATTC GCCCGCAGCC GGCCGCTCGA CGGCGCGGCG CTGGTGCTGG ATTCCAGCGG TGGCTCGGTC AACGACGCGA TCACGCTGGG CCGGCGCTGG CGCAAGATGG GGCTGATGAC CACGGTCGGC GCCAGCGTGC GGACGCAGAC GCCGTCCGGC GTTCGCGCCG GCATCGCGCC GCAGGCCTAT TGCGAGTCGA TGTGCGTGTT CCTGCTGCTG GCCGGCAAGA CCCGCTACGT GCCCGAGGGC GCCCGGGTCC GGGTCCACCA GATCTGGATG GGCGACCGCG CCGAGGACGC CCGCGCCGCC AGCTACACCG CCCAGGACCT CACCATCATC GAGCGCGATA TCGGCCGGCT CGCCAAATAC ACCTTCGAGA TGGGCGGCAC CGGCGACCTG CTGGCGCTCG CGCTCAGCGT GCCGCCCTGG GAGGATCTGC ACCAGCTGTC GCCGCAGGAA CTGCGCGACG CCAATCTGGT CACCGCCCAG GCTTTGGCCG AGCTGCTGCC GCCGAAGCGC GAGGGCAGCG CGACGCCGGT CGCCGCCACT CCTGTCGCCG CGGCAAGTCC CGCCACCGGC CCCAAGCCGG TGCAGGACCG CTTCGTCCAG GTGCCCACCA CCCCGACCAA AACCGCCGAA GCCGCCCTGC CGACCGGCGG CACCGCCCCG GCCGCGCCGC CTCCGCAATA A
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Protein sequence | MNAAVLSRFA RSTLTRVAAL GFVLLGAAAG PTPSAQAGGS LEQRKLPMRF DWVACEPNCT GWISAVGIVT ADTPKEFDEF ARSRPLDGAA LVLDSSGGSV NDAITLGRRW RKMGLMTTVG ASVRTQTPSG VRAGIAPQAY CESMCVFLLL AGKTRYVPEG ARVRVHQIWM GDRAEDARAA SYTAQDLTII ERDIGRLAKY TFEMGGTGDL LALALSVPPW EDLHQLSPQE LRDANLVTAQ ALAELLPPKR EGSATPVAAT PVAAASPATG PKPVQDRFVQ VPTTPTKTAE AALPTGGTAP AAPPPQ
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