Gene RPB_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2182 
Symbol 
ID3909962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2475944 
End bp2476864 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content72% 
IMG OID637884076 
Producthypothetical protein 
Protein accessionYP_485799 
Protein GI86749303 
COG category[S] Function unknown 
COG ID[COG3904] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.172075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0204408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCG CTGTTCTGTC CCGCTTCGCC AGATCGACGC TCACACGCGT CGCCGCGCTC 
GGCTTTGTGC TGCTCGGCGC CGCGGCGGGG CCGACGCCAT CGGCGCAGGC CGGCGGCAGC
CTCGAGCAGC GTAAGCTTCC GATGCGGTTC GACTGGGTCG CCTGCGAGCC GAACTGCACC
GGCTGGATCA GCGCGGTCGG CATCGTCACC GCCGACACCC CGAAGGAGTT CGACGAATTC
GCCCGCAGCC GGCCGCTCGA CGGCGCGGCG CTGGTGCTGG ATTCCAGCGG TGGCTCGGTC
AACGACGCGA TCACGCTGGG CCGGCGCTGG CGCAAGATGG GGCTGATGAC CACGGTCGGC
GCCAGCGTGC GGACGCAGAC GCCGTCCGGC GTTCGCGCCG GCATCGCGCC GCAGGCCTAT
TGCGAGTCGA TGTGCGTGTT CCTGCTGCTG GCCGGCAAGA CCCGCTACGT GCCCGAGGGC
GCCCGGGTCC GGGTCCACCA GATCTGGATG GGCGACCGCG CCGAGGACGC CCGCGCCGCC
AGCTACACCG CCCAGGACCT CACCATCATC GAGCGCGATA TCGGCCGGCT CGCCAAATAC
ACCTTCGAGA TGGGCGGCAC CGGCGACCTG CTGGCGCTCG CGCTCAGCGT GCCGCCCTGG
GAGGATCTGC ACCAGCTGTC GCCGCAGGAA CTGCGCGACG CCAATCTGGT CACCGCCCAG
GCTTTGGCCG AGCTGCTGCC GCCGAAGCGC GAGGGCAGCG CGACGCCGGT CGCCGCCACT
CCTGTCGCCG CGGCAAGTCC CGCCACCGGC CCCAAGCCGG TGCAGGACCG CTTCGTCCAG
GTGCCCACCA CCCCGACCAA AACCGCCGAA GCCGCCCTGC CGACCGGCGG CACCGCCCCG
GCCGCGCCGC CTCCGCAATA A
 
Protein sequence
MNAAVLSRFA RSTLTRVAAL GFVLLGAAAG PTPSAQAGGS LEQRKLPMRF DWVACEPNCT 
GWISAVGIVT ADTPKEFDEF ARSRPLDGAA LVLDSSGGSV NDAITLGRRW RKMGLMTTVG
ASVRTQTPSG VRAGIAPQAY CESMCVFLLL AGKTRYVPEG ARVRVHQIWM GDRAEDARAA
SYTAQDLTII ERDIGRLAKY TFEMGGTGDL LALALSVPPW EDLHQLSPQE LRDANLVTAQ
ALAELLPPKR EGSATPVAAT PVAAASPATG PKPVQDRFVQ VPTTPTKTAE AALPTGGTAP
AAPPPQ