| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2102 |
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| Symbol | |
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| ID | 3908516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2390044 |
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| End bp | 2391570 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883995 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_485719 |
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| Protein GI | 86749223 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0103698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00738947 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCTGT CCGAATGGCT CGCCGCGAGC GCACGGCTGC GGCCGTCCGC GCCGGCCTTG
CTCACCGGCA CCACGATCGA GGCGGACTAC GCGACGTTCG CGCAGCGCGC CGCCTCGTTC
GCTGCAGCGC TGCAGCGCGA CTACGGCATC GTCTCCGGCG ACCGCGTCGC GCTGTTCGCG
CATAATTGCA CGCAATATCT CGAGGCACTG TACGGCATCT GGTGGGCGGG CGCGGTGGCG
GTGCCGATCA ACGCCAAGCT GCACGGCAAG GAAGCGGCGT GGATCTGCAG CAATTCCGGC
GCCAAGCTGG CGCTGATCTG CGACGACACC GCGGACACTT TCAACGAGGC CGCGGGCGAA
TTGCCGGCCC GCATGGCGAC GCTGGCGCTC GACAGCGACG CCTACATTCG CGCCCGTAGC
GGCGACGGGC CGGCGGCGCC GGCGGCGCGC GAGGACGGCG ATCTCGCCTG GCTGTTCTAC
ACCTCCGGCA CCACCGGCCG GCCGAAGGGG GTGATGCTCA GCCACGGCAA TCTGATCGCG
ATGTCGCTGT GCTATTTGGC CGATGTCGAC ACGGTGTCGT CCGATGACGC CGCGCTCTAT
GCCGCGCCGA TCTCGCACGG TGCCGGGCTC TACAACATGA TCCACACCCG GTTCGGCGCG
CGTCACGTCG TGCCCGCCTC CAAGGGCTTC GACCCCGACG AGGTGCTGAC GCTCGGCAAG
CAGCTCGGCA ACGTCGCGAT GTTCGCCGCG CCCACCATGG TGAAGCGGCT GGTCGAGGCC
GCAAGGCGCC GCGGCGAGCG CGGCGAGGGA CTGCGCACCA TCGTCTACGG CGGCGGCCCG
ATGTATCTCG CCGACATCCG CGACGCGCTC GACGTGATGG GCCAGCGCTT CGTGCAGATC
TACGGCCAGG GCGAATCGCC GATGGCGATC ACGTCGCTGA AGCGCGAGTT GCACGCCGAT
GTCGATCATC CGCGCTATCT GCAGCGGCTG GCCTCGGTCG GCACCGCGCA GAGCGCGCTG
TCGGTGCGGA TCACCGGGCC TGACGGCGAG GTGCTGCCGG CCGGCGAGAC CGGCGAGATC
GAGGCCAAGG GCCCGACCGT GATGCTCGGC TACTGGAACA ATTCGGACGC CAACGCCGAG
ACGCTGAAAG ACGGCTGGCT GCGCACCGGC GATGTCGGGC GCCTGGACGA GGACGGCTTT
CTCACGCTGT CGGACCGCTC CAAGGACGTG ATCATCTCCG GCGGCACCAA CATCTATCCG
CGCGAAGTGG AAGAAGCGCT GCTGACGCAT CCCGCGGTGC GCGAGGTCTC GGCGATCGGC
GTCGCCGATC CGGAATGGGG CGAGACCGTG GTCGCCTGTG TGGTGCTGGC GGACGGATCG
GAGCCCAGCG ACACTGCGCT CGACGCGCAT TGCCTCGCCG CCATCGCCCG CTTCAAGCGG
CCGAAGCGCT ACGTCTATCT GGAAGCGTTG CCGAAGAACA ATTACGGCAA GGTGCTGAAG
ACCGAGCTGC GCAAGATGGT GACTTAG
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| Protein sequence | MNLSEWLAAS ARLRPSAPAL LTGTTIEADY ATFAQRAASF AAALQRDYGI VSGDRVALFA
HNCTQYLEAL YGIWWAGAVA VPINAKLHGK EAAWICSNSG AKLALICDDT ADTFNEAAGE
LPARMATLAL DSDAYIRARS GDGPAAPAAR EDGDLAWLFY TSGTTGRPKG VMLSHGNLIA
MSLCYLADVD TVSSDDAALY AAPISHGAGL YNMIHTRFGA RHVVPASKGF DPDEVLTLGK
QLGNVAMFAA PTMVKRLVEA ARRRGERGEG LRTIVYGGGP MYLADIRDAL DVMGQRFVQI
YGQGESPMAI TSLKRELHAD VDHPRYLQRL ASVGTAQSAL SVRITGPDGE VLPAGETGEI
EAKGPTVMLG YWNNSDANAE TLKDGWLRTG DVGRLDEDGF LTLSDRSKDV IISGGTNIYP
REVEEALLTH PAVREVSAIG VADPEWGETV VACVVLADGS EPSDTALDAH CLAAIARFKR
PKRYVYLEAL PKNNYGKVLK TELRKMVT
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