| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2085 |
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| Symbol | |
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| ID | 3908498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2370632 |
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| End bp | 2371831 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637883977 |
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| Product | amidase |
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| Protein accession | YP_485702 |
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| Protein GI | 86749206 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.769638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.071068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGC CGGTCGACGA CAATCTGAAC GCGTTCTGCA CCCATGGCCG GGGCGATCGG
CGGACGCAGG ACAGCGGCGC GCTGGCCGGG CTGACCTTCG CGGTGAAGGA TTTCTTCGAC
GTCGCGGGTC TGCCGACCGG CGCCGGCAGC CCGGAATGGC TGGCGACCCA TCCGGTGCCG
ACGCAATCCT CGCCCGTGGT CGACCGGCTG TTCGCCGCCG GCGGCACCAT GGTCGGCAAG
ACCCACACCG ACGAGATGGC GTGGAGCCTC AATGGCGAGA ACGCGCATTA CGGCACGCCG
ATCAATCCGG CCGCGCCGGG GCGGATTCCG GGCGGCTCGT CGAGCGGCTC GGCCGCGGCC
ACCGCCGGCG GGCTGGTGGA TTTCGCGATC GGCTCGGACA CCGGCGGCTC GGTGCGGCTG
CCGGCGAGCT ATTGCGGCGT CTACGGCATC CGCACCACGC ATGGGCGGAT TCCGCTCGAC
GGCGCGGTGC CGCTGGCGCC GAGTTACGAC ACCGTCGGCT GGTTTTCGCG CAGCGCTGCG
CTGATGGCGC GGGTGGGTGA GGTGCTGCTC GACGGCGTCC GCGCGCCGCG GCGGCCCAAG
CGCGTGCTGA TCGCGCGCGA TCTGTTCGCC GCGCTCGAGC CGCGCGTCGT CGAGGTGTTG
CAGCCCGGGC TCGCGCAGCT CGCCGCGATG CTCGGCGAGC CCGAGCCGGT CGAGGTCGCG
GGCGATCAGC GCCCGGCATG GCGCAATGCG TTTCGCGTGC TGCAATCCGC CGAGGCCTGG
GCGGCGCATG GCGCGTGGGT GAACGCGGTG AAGCCGGCGT TCGGCCCCGG CGTCAAGGAA
CGCTTCGCCG CCGCCGCGGT GCTCGATCCG GCCGAAGTCG TCGCAGCGAA AGCGCTGCGC
GACACCATCA CGGCGACGAT GCGGACGCTG CTGCAGGACG ACGCCGTGCT GATCGCGCCG
ACCGCCCCCG GCATCGCGCC GCTGCGCAAC AGCACGGGCG AGGCGCTGGA AACCTTCCGC
GCCCGCTCGC TCGAACTGCT CTGCCCCGCC GGCCACGCCG GCCTGCCGCA ACTGTCGCTG
CCGCTCGCCA CGCTCGACGA CTGCCCGATC GGCCTCTCGC TGATCGGCGG TCGCGCCTGC
GACGAGGATC TGCTGGCGCT CGCGGCGGAG CTGGAGGCGG GGAGCACGAA GCCGCGCTGA
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| Protein sequence | MTMPVDDNLN AFCTHGRGDR RTQDSGALAG LTFAVKDFFD VAGLPTGAGS PEWLATHPVP
TQSSPVVDRL FAAGGTMVGK THTDEMAWSL NGENAHYGTP INPAAPGRIP GGSSSGSAAA
TAGGLVDFAI GSDTGGSVRL PASYCGVYGI RTTHGRIPLD GAVPLAPSYD TVGWFSRSAA
LMARVGEVLL DGVRAPRRPK RVLIARDLFA ALEPRVVEVL QPGLAQLAAM LGEPEPVEVA
GDQRPAWRNA FRVLQSAEAW AAHGAWVNAV KPAFGPGVKE RFAAAAVLDP AEVVAAKALR
DTITATMRTL LQDDAVLIAP TAPGIAPLRN STGEALETFR ARSLELLCPA GHAGLPQLSL
PLATLDDCPI GLSLIGGRAC DEDLLALAAE LEAGSTKPR
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