Gene RPB_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2066 
Symbol 
ID3909881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2348018 
End bp2349094 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content72% 
IMG OID637883958 
Productoxidoreductase-like 
Protein accessionYP_485683 
Protein GI86749187 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC CGCTGCGGCA GGAACCGCTG CGGCTCGGCC TGTGCGGCTG CGGCTGGGTG 
ATCCGGCATT GCTATCAGCC GGCGCTGGCG GAGCTTTCGG CGCTGTTCGA GGTCGTGGCG
GTCTTCGATC CCGATCCGGC CGCGCTGCAG CGGGCCGCAC ATGCGTGGCC GGCGGCGCGG
CGCTGCGATT CGTTCGAGGA GTTGCTCGCC GCGCATCCGG ATGCGGCGGT GATCGCCTCG
CCGAACGCCT GTCATCTCGA CCACGCAACC GCATTGCTCG CCGCCGGCAT CTCGTGCCTG
GTCGAGAAGC CGGTGGTGCG CGACACGGCC GACGCCGCGC TGCTGCAGGC TGCGGCGCAG
AGCGGCGCGG CGCTGGTCAG CGGCGTCGCC TGCCGCTTTC GCGATGATAC ACGACTGTGG
CTCGATCAGG TCGCGTTGCT CGGTCCGCTC ACCGAACTCG ATCTGGTCTG GAGTCGCGAG
CACGGCGTGC CGTCGGCGCC GTGGCATCTG CGCCGCGCGG ACGGCTGGAC CGGCGTGTTC
GCCGATCTCG GCTATCATCT GCTGGACCTC GCCGGCGCGG CGCTGCGCTG GCGCGCCGAA
CGCATCGACG TCGCCATGGT GCAACGCGCG TCACAGCGTC GTGGCGCGGG CGCCTCCTGG
TATGTCGAGG GCAGCAAGGT CCGTGCCGGG TCGCTGGCCT ACGACACCGA CGATCGCTTC
GGCGCCACGC TGGCGGTCGA CGGCTGCCGG ATCGGCCTGC GCGTCGCCTG GATCGACAGC
GCGCGCGGCG ATCTGGTGCG GCTCGAGGCG CGCGGTGCGC GGGGCGAAGC CGTGCTCAGC
GGGCTGTTCG GATTTTCCGA CAACCGCCGT GAGCGCGATC AGCAAGTGGT GCTGCGGCTG
CACGGCCGCG ACAAGATCCG TACCACATTC GAAACCGGGC CCGAGTTGCA ACTTTGCGCC
TTCGCGACCC TGCTGCGACA TTTTCATCGC TGCGTCCGCG CCGGCGCGGA CGAGGAAGCC
GCCGCGCTGC GGTTCGCCGC CGCGCTCGGC GGCGCCTTGC GGGAGGCGGC GGCATGA
 
Protein sequence
MTAPLRQEPL RLGLCGCGWV IRHCYQPALA ELSALFEVVA VFDPDPAALQ RAAHAWPAAR 
RCDSFEELLA AHPDAAVIAS PNACHLDHAT ALLAAGISCL VEKPVVRDTA DAALLQAAAQ
SGAALVSGVA CRFRDDTRLW LDQVALLGPL TELDLVWSRE HGVPSAPWHL RRADGWTGVF
ADLGYHLLDL AGAALRWRAE RIDVAMVQRA SQRRGAGASW YVEGSKVRAG SLAYDTDDRF
GATLAVDGCR IGLRVAWIDS ARGDLVRLEA RGARGEAVLS GLFGFSDNRR ERDQQVVLRL
HGRDKIRTTF ETGPELQLCA FATLLRHFHR CVRAGADEEA AALRFAAALG GALREAAA