Gene RPB_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2063 
Symbol 
ID3909878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2344727 
End bp2345638 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID637883955 
ProductFatty acid desaturase 
Protein accessionYP_485680 
Protein GI86749184 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCC GTGTCCCGTC CAACCCGCAT GCGCCGCTCA GGCTCGCCAT CTATCTCGGC 
GCGATCGTTG CGCTGCTCGC GGCGATCGTC GTCGTGCCGG GGACGGCGGC CGGGATCGCA
GCGGCGCTGC TGCTGGGGAT CGTCTACGCC CACGGCCTCG AACTGCAGCA CGAGACGCTG
CACGGCATCT TCCTCGCGAC CGAGGCCGGC AACCGGCTCG CCGGCTCGCT GCTCGGCCTG
CCGATGCTCA CCACCTTCAC CGACACCCGC GTCCGCCACC TGCATCATCA CCGCTATGTC
GGCACGCCGC AGGATGTGTT CGACCGCAGC TGCGCGGATT TCTCGAACCG GCGCGCGCTG
CTCGGCCATG TCTTCGCGGC GACGCGGCTG CGCGATTTCA TCGGCGCCAC GGCGACGCTG
CTGTCCGGGC GCCGGCACGA TGTGCTCAAG GCCCCTGCGC GCGATCGGGC GAGGACCGAG
TTCGTCGCCA CCGCGCTGAT CCTGCTCGCG CTGCTCGCGC TCGCGGCGCT GATCGATCCG
CGGCTGTTGC TGTGGGGCTG GATCGTGCCG GCGCTGATCG TCGCGCCGGC CGTGCACTTC
CTGATGACGG TGCACGAACA TATCGGCCGG CCGCGGCTGA CGCGCCGGAT CACCGAGAAT
TCGCGCAGCT ACCGGGCGCC GGCGTGGTGG AACTATCTGG TCCACTACGA CAATTATCAC
ATCGAGCATC ATCTGGAACC CGGCCTGCCG TTCCCGCAAC TGCCCGCCTT CCACGCCGAG
CGTCGCCGCG CCGGCGCCGA CAGCCTGACC TTGTCGCAGG CGATGGCCGA GACGGCGCGC
GGCATCGCCG CGTGCCTGCG CGCATCCGCA TCCACCGCAA CGCGAACGGA GCCGCCGCGA
TGTGCGCCAT AG
 
Protein sequence
MPSRVPSNPH APLRLAIYLG AIVALLAAIV VVPGTAAGIA AALLLGIVYA HGLELQHETL 
HGIFLATEAG NRLAGSLLGL PMLTTFTDTR VRHLHHHRYV GTPQDVFDRS CADFSNRRAL
LGHVFAATRL RDFIGATATL LSGRRHDVLK APARDRARTE FVATALILLA LLALAALIDP
RLLLWGWIVP ALIVAPAVHF LMTVHEHIGR PRLTRRITEN SRSYRAPAWW NYLVHYDNYH
IEHHLEPGLP FPQLPAFHAE RRRAGADSLT LSQAMAETAR GIAACLRASA STATRTEPPR
CAP