| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2044 |
|---|
| Symbol | |
|---|
| ID | 3909859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2323025 |
|---|
| End bp | 2324176 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637883937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485662 |
|---|
| Protein GI | 86749166 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1568] Predicted methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC CCGAAATCCT GAAAACCATC GCCGAGGCGA CCCGGCTGCG CGAAGGCCCG
GCCGGCGTCG AGGCGATCCT GCGTGCGGTG TATCGCTCGG GCTCGCTGCG GCTGCAGGAC
GTCGCCCGCG AGGCCCGGCT GCCGATGCCG ATTGCCACCG CCGTCCGCCG CGAACTGGAG
AAGGCCGGGC TGCTGGAGCG CAAGCAGGGC CTGGCGCTGA GCCCCGAGGG CCGCGACTTC
GTCGAGCGCG AACTCGGGCT CGGCATCACC ATCGACGTCA CCTGCCCGGC CTGCGCCGGC
CATGGCGTGG TGATCCCCGC GGATTTCCAG GCGCAGGTCG GCCGGCTCGC CGCCATCATC
GCGCAGGCGC CATCGGTCGA TGTCACGCTG GATCAGGCGC CGTGCACCCC GGAGACGTCG
CTGCTGCGTG CGCTTCTGAT GCTGCAGGCC GGCGCGCTGG AAGGCCGCCG GGTGCTGCTG
CTCGGCGACG ACGATTCGGT GTCACTGGCG ATCGGCCTCG TCGGCCAGGC GCTGGGCAAG
GCCGACCTCA CCCGCGGCGT GGTGGTGGTC GACGCGGACG AGCGCCGGCT CGCCTTCCTG
CGCGAGAATG CTGCCCGCGA AGGCATCGCG CTGCGCACGC TGCATCACGA TCTGCGCCAG
CCGCTGCCGG CCGAGTTGCA GGGCGCGTTC GACACCATCG AGACCGACCC GCCCTACACG
CTCGAAGGCG CGAAGCTGTT TCTGACGCGC GGCCGCGAGG CGCTGGCCGG CGACGGGCTG
TGCTACTTTT CGTTCGCGCA ATGGCCGCCG CGGCAGATGC TGGCATTGCA GCGGGTGTTT
CTCGATCTCG GCCTCGCGGT GCAGACGATC CGGCCGGGCT TCAACGCCTA TGCGGGCGCC
ACCGTGCTTG GCAATGTCGG GCAACTGATC GAACTCGCCG CCGCGGGCCC GGCCGCCGCC
GCATTGCCGG CGTGGCAGGG ACCGCTGTAC ACCGCCGAGA TCAATCCGCG GATCCGCGCC
TATGTCTGCA CGTCATGCGG CCGCGAGGCC GTCCTGGGGC GCGGCTCGAC GCCGGAGACG
ATCGAGGCGT TGAAGGATCA GGGATGCGCG AATTGCGGCG GGCACAGCTT CCGCCGCAAG
ACCGGCGGCT GA
|
|---|
| Protein sequence | MADPEILKTI AEATRLREGP AGVEAILRAV YRSGSLRLQD VAREARLPMP IATAVRRELE
KAGLLERKQG LALSPEGRDF VERELGLGIT IDVTCPACAG HGVVIPADFQ AQVGRLAAII
AQAPSVDVTL DQAPCTPETS LLRALLMLQA GALEGRRVLL LGDDDSVSLA IGLVGQALGK
ADLTRGVVVV DADERRLAFL RENAAREGIA LRTLHHDLRQ PLPAELQGAF DTIETDPPYT
LEGAKLFLTR GREALAGDGL CYFSFAQWPP RQMLALQRVF LDLGLAVQTI RPGFNAYAGA
TVLGNVGQLI ELAAAGPAAA ALPAWQGPLY TAEINPRIRA YVCTSCGREA VLGRGSTPET
IEALKDQGCA NCGGHSFRRK TGG
|
|---|
| |