Gene RPB_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1999 
Symbol 
ID3909505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2270903 
End bp2271739 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID637883893 
Producthypothetical protein 
Protein accessionYP_485618 
Protein GI86749122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.783842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGG CGTGGCTCGA CCTTCCCACT TACGGCACCT TCGTCACGCT GGCGCTGTTG 
TACTACGGCG TGGCGCTGAC GCTGGTCGTC CTGACCTGCG CCTCGCCGCT GCGTGGGCCG
GTCTCGAAGC TGAACGGGGT CGTCGCGCCG TTCTTCTCCT CGGTTGCGGT GCTGTTCGGA
TTGCTCACCG GCTTCCTCGG CTACGACGTC ACCGAGCGCA ATCGCCAGGC GTCCCGGGCG
GTGCAGGCCG AGGCCGGCGA ACTGCAGAAT CTGTATACGC TCAGCGTCGC CTCCGTCACC
GACATGCGCG ATATCCGCAT CGCGCTGAAG GGCTATGCCG CGTCCGTGCT GCACGACGAA
TGGCCGGCCG CGCATGGCGA GAGCGCGCCG CGGACCAATG CGGCCTATGA CACCCTGCTC
GGCGAACTCA GCGATCCCGC GATCAGTCGC GACGCCAGCG CCGCGGTCCA CGTGGCGATG
CTCAGCGCAG CGGTGCGGGT CGGCACCGCG CGCAACGCAA GGCTCAGCCT GTCGACCGAT
CGCACCAGCG ACCTGAAATG GATTTCGGTG CTGCTGCTCG GCGTGATCAC GCAGGTGGCG
TTGACCTTGG TGCATCTCGA CAAGCCGCGC GCGATGCTCG CGGCGCTGAC GGTGTTCGCC
ACCGGCGCGA TCGTCGCGCT CGGGATGATC GCGCTGCAGG AAGATCCGTT CGGCGGCGTA
TTTCGGGTGT CGTCGACGCC GATCGAGCGG CTGCTGTCGC TATCCGACAC GGTGGCGCCG
CCGGTCGCGC CCGCCCCGGC GCCTGCGACG GCTCCGCCGT CCGCCGCGCC GAAGTAA
 
Protein sequence
MIRAWLDLPT YGTFVTLALL YYGVALTLVV LTCASPLRGP VSKLNGVVAP FFSSVAVLFG 
LLTGFLGYDV TERNRQASRA VQAEAGELQN LYTLSVASVT DMRDIRIALK GYAASVLHDE
WPAAHGESAP RTNAAYDTLL GELSDPAISR DASAAVHVAM LSAAVRVGTA RNARLSLSTD
RTSDLKWISV LLLGVITQVA LTLVHLDKPR AMLAALTVFA TGAIVALGMI ALQEDPFGGV
FRVSSTPIER LLSLSDTVAP PVAPAPAPAT APPSAAPK