| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1978 |
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| Symbol | |
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| ID | 3909483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2247164 |
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| End bp | 2248372 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883872 |
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| Product | extensin-like protein |
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| Protein accession | YP_485597 |
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| Protein GI | 86749101 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.259223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCG GAGTTCGTTT GTATCTCGTC GGCTCCTTCG TCCTCGTGTC GCTTGCCGGT
TGCGGACGCG GTTTGTTTCA AACCGCCGAG CGTGAACCGT GGCGGACCGA GGCCGAGGTC
GCTTGTCTGA AATCGGGCGC CGTCAAGGAA GGCCCCGAAC TGGTCCGGGT CGATCCGATC
TCGGGCCCCG GCGTCTGCGG CGCCGAGTTT CCCCTCAAAG TGGCTGCGCT CGGCGAGAGT
GGCGCGATCG GCTTTGCCGA CGATTTGCGT CCGCCAGCGG CGATCGGAGG TCGCGCCAGC
CAGCCGCGCT GGCCGGGGGC GCAGCCGTCT TATGCGGCGC CGGCGCGCGG CTATCCGCAA
CAGCAAACCG GCTACGGCGC TTCGAATCCT CCCTACGGCA GCAACAATGC TCCGGTGTCG
CTGACCGCGC CCGGCGTCGG CCCCGCGGGC CGGGACATCG ATCTGCCGGA CGAGGGCGCG
CTGCCGCCTG CGGATCGTCC GCCGGCCGAG CACGTCACCG GCTATTCGCG CGATCCGAGC
TACGCACCGG CGCCCGCCGG TCGTGCGCCG GACGACGCGC GGCGCCCATT GCCGCGGCTC
GGTCCGGCGC AGCAGGGCAA CATCACCGGC TCGGTCGGGC CGGTCGCGAT CAAGCCGGTG
GCGACGCTGG CGTGTCCGAT CGTCTCCGCG CTGGACCGCT GGCTGGTGGA ATCGGTGCAG
CCGTCGGCGA TGCGCTGGTT CGGTGTCCCC GTCGTCGAAA TCAAGCAGAT CTCGGCCTAT
TCGTGCCGCG GCATGAACGG CAATCCGAAC GCGCACATCT CCGAACACGC CTTCGGCAAC
GCGCTCGACA TCTCCGCCTT CGTGCTGGCC GACGGCCGGC GCGTGACGGT GAAGGGCGGC
TGGAAGGGAT TGCCGGAAGA GCAGGCGTTC CTGCACGACG TGCAGAACTC GGCGTGCCAA
ATGTTCAACA CCGTGCTGGC GCCGGGCTCG AACATCTATC ACTACGATCA CATCCACGTC
GACCTGATGC GCCGCAAGAG CCAGCGCAGC ATCTGCAAGC CCGCCGCGGT GCCGGGCGAA
GTGATCGCGC AGCGGCTGCA GGGGCGCAAT CCCTATGCGT CGGGCAATTG GAACGGCGTC
ACCGGCTCGA TCGGCAAAGT CCCGGCGCGT GCGAAGGCGG TGGATCGCGA CGAAGCCGAA
GACGATTAG
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| Protein sequence | MTRGVRLYLV GSFVLVSLAG CGRGLFQTAE REPWRTEAEV ACLKSGAVKE GPELVRVDPI
SGPGVCGAEF PLKVAALGES GAIGFADDLR PPAAIGGRAS QPRWPGAQPS YAAPARGYPQ
QQTGYGASNP PYGSNNAPVS LTAPGVGPAG RDIDLPDEGA LPPADRPPAE HVTGYSRDPS
YAPAPAGRAP DDARRPLPRL GPAQQGNITG SVGPVAIKPV ATLACPIVSA LDRWLVESVQ
PSAMRWFGVP VVEIKQISAY SCRGMNGNPN AHISEHAFGN ALDISAFVLA DGRRVTVKGG
WKGLPEEQAF LHDVQNSACQ MFNTVLAPGS NIYHYDHIHV DLMRRKSQRS ICKPAAVPGE
VIAQRLQGRN PYASGNWNGV TGSIGKVPAR AKAVDRDEAE DD
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