Gene RPB_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1956 
SymbolthiG 
ID3908035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2223326 
End bp2224108 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID637883850 
Productthiazole synthase 
Protein accessionYP_485575 
Protein GI86749079 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.737672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAT TCTACGACCG CGAGATCTCC TCGCGCCTGC TGATCGGCAG CGCGCTGTAT 
CCGTCGCCGG CGATCATGCA GGATTCCATC CGCGAATCCG GCGCGGACAT CGTCACCGTG
TCGCTGCGCC GCGAGGCCGC CGGCGGCAAG GCGGGCGATC AGTTCTGGTC GCTGATCCGC
GAGCTCGGCG TCACCGTGCT GCCGAACACC GCCGGCTGCC GCAGCGTGCG CGAGGCGGTG
ACCACGGCAA AGCTGGCGCG CGAATTGTTC GGCACCGCAT GGATCAAGCT CGAAGTCATC
GCCGACAACG ACACGCTGCA GCCCGACGTC GTCGGCTTGG TCGAAGCGGC GCAAATCCTG
ACCAAGGACG GCTTCGAGGT GTTTCCCTAT TGCACCGAGG ATCTGTCGGT GGCGATGCGG
CTGGTCGATG CCGGCTGCCG CGTCATCATG CCGTGGGCGG CGCCGATCGG CAGCGCGCGC
GGCATCGTCG CTCGCGACGC GCTGAAGCTG CTGCGCGACC GCCTGCCCGA TATCACCCTC
GTCGTCGATG CCGGCCTCGG CGCGCCGAGC CACGCGGCCG AAGCGATGGA GCTCGGCTAC
GACGCCGTCC TCCTCAACAC CGCGATCGCC AAAGCCGAAG ATCCGGTGGC GATGGCCCGC
GCCTTCAAGC TCGCGGTCGA AGCCGGCCGC ACCGGATTCG AGGCCGGGCT GATGGGCGCC
CGCGATTTCG CCTCCCCCTC AACCCCCGTG ATTGGGACCC CGTTCTGGCA TGCCGTATCC
TGA
 
Protein sequence
MVKFYDREIS SRLLIGSALY PSPAIMQDSI RESGADIVTV SLRREAAGGK AGDQFWSLIR 
ELGVTVLPNT AGCRSVREAV TTAKLARELF GTAWIKLEVI ADNDTLQPDV VGLVEAAQIL
TKDGFEVFPY CTEDLSVAMR LVDAGCRVIM PWAAPIGSAR GIVARDALKL LRDRLPDITL
VVDAGLGAPS HAAEAMELGY DAVLLNTAIA KAEDPVAMAR AFKLAVEAGR TGFEAGLMGA
RDFASPSTPV IGTPFWHAVS