Gene RPB_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1934 
Symbol 
ID3908013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2204424 
End bp2204858 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content70% 
IMG OID637883828 
Producthypothetical protein 
Protein accessionYP_485553 
Protein GI86749057 
COG category[S] Function unknown 
COG ID[COG4270] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CGGCGCAGAG CGGCGGCCAC TCGTCGAATC CGTGGCGCGC CGTTTTGCGC 
TGGATCCTCG CTGCGTTCTT CGTCGCAGCC GGCGTGGCGC ATCTCGCCGT GCCCGACAAG
CTGCTCGCGA TGACGCCCGG CTGGGTGCAG TTCGCACCGC AGGTGATCCT GCTCACCGGC
CTGTGCGAAT TCGCCGGCGC GGCTGCGCTG GTGACGCGGC CGCTACGCTG GTGGGCCGGC
GTCGCGCTCG CGCTGTATTC GCTGTGCGTG TGGCCGGCGA ATATCATGCA CGCGGTAGAC
GGCATCGAAA TTCCGGGGCT GCCGAGTAGT TGGTGGTATC ACGGCCCGCG GCTCGCGGCG
CAGCCGCTGA TCATCTGGGC ATCGCTGTAT GCCGCCGGCG TTGTGGACTG GCCGTTCCGG
CGCCGACGCG CCTGA
 
Protein sequence
MSEAAQSGGH SSNPWRAVLR WILAAFFVAA GVAHLAVPDK LLAMTPGWVQ FAPQVILLTG 
LCEFAGAAAL VTRPLRWWAG VALALYSLCV WPANIMHAVD GIEIPGLPSS WWYHGPRLAA
QPLIIWASLY AAGVVDWPFR RRRA