Gene RPB_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1893 
Symbol 
ID3907972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2168191 
End bp2168862 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID637883787 
Producthypothetical protein 
Protein accessionYP_485512 
Protein GI86749016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG CCGGACAGGG AATGCTGCTG ACCTCAATGG ACGTCGATCC GGCCGACGAG 
GCCGACTTCA ATCGCTGGTA CGACCGCGAA CACATCGCCG AGCGCGTCGC GATCGACGGC
TTTCTCGAAG CCCGGCGCTA CGTCGCGCAC GACGCCTCGC CGAAATATCT CGGCCTGTAT
TCGACCCGGA CGTTCGACGT GCTGAGCAGC CCGGCCTATC GCGCGGCGCT CGCCAATCAG
ACCGAATGGT CGAACCGCAA TATCGCCAAA TTCCAGAACA TGATCCGCGG CGTGGCGCGG
ATCACCGCGA GCCGCGGCCA GGGTCGCGGC GCCGTGCTCG GCCTGGTCCG GATCAGGCCC
GCTCTCGGCA GCGAGGCGAC GTTGCGCGCG GCCATCGCCG AGCGACTCGA TCCGCTGCCG
TTCGACGGCC TCATTTCGAT GCATCTTCTG GAAAACGATC CGGCCTTGTC GAGGCCGCTG
ACCGACCCGC CCGGCGTGGT CAGTCCCGGG GCGTTGGACT GGTTCGTCCT GATCGACGGC
ACCGGCGTCG ACGCCGTGCG AACTGCAACG GCCGGTTTCG AGCGGAGCAT CGTGGAAAAC
GGATCGGCGG TGGTCAGCGC CGGAATCTAC AAACTGCTGT GGGACCTGTC GAAAAGCGAT
CTCGGCGACT GA
 
Protein sequence
MPLAGQGMLL TSMDVDPADE ADFNRWYDRE HIAERVAIDG FLEARRYVAH DASPKYLGLY 
STRTFDVLSS PAYRAALANQ TEWSNRNIAK FQNMIRGVAR ITASRGQGRG AVLGLVRIRP
ALGSEATLRA AIAERLDPLP FDGLISMHLL ENDPALSRPL TDPPGVVSPG ALDWFVLIDG
TGVDAVRTAT AGFERSIVEN GSAVVSAGIY KLLWDLSKSD LGD