Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1893 |
Symbol | |
ID | 3907972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2168191 |
End bp | 2168862 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883787 |
Product | hypothetical protein |
Protein accession | YP_485512 |
Protein GI | 86749016 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCTCG CCGGACAGGG AATGCTGCTG ACCTCAATGG ACGTCGATCC GGCCGACGAG GCCGACTTCA ATCGCTGGTA CGACCGCGAA CACATCGCCG AGCGCGTCGC GATCGACGGC TTTCTCGAAG CCCGGCGCTA CGTCGCGCAC GACGCCTCGC CGAAATATCT CGGCCTGTAT TCGACCCGGA CGTTCGACGT GCTGAGCAGC CCGGCCTATC GCGCGGCGCT CGCCAATCAG ACCGAATGGT CGAACCGCAA TATCGCCAAA TTCCAGAACA TGATCCGCGG CGTGGCGCGG ATCACCGCGA GCCGCGGCCA GGGTCGCGGC GCCGTGCTCG GCCTGGTCCG GATCAGGCCC GCTCTCGGCA GCGAGGCGAC GTTGCGCGCG GCCATCGCCG AGCGACTCGA TCCGCTGCCG TTCGACGGCC TCATTTCGAT GCATCTTCTG GAAAACGATC CGGCCTTGTC GAGGCCGCTG ACCGACCCGC CCGGCGTGGT CAGTCCCGGG GCGTTGGACT GGTTCGTCCT GATCGACGGC ACCGGCGTCG ACGCCGTGCG AACTGCAACG GCCGGTTTCG AGCGGAGCAT CGTGGAAAAC GGATCGGCGG TGGTCAGCGC CGGAATCTAC AAACTGCTGT GGGACCTGTC GAAAAGCGAT CTCGGCGACT GA
|
Protein sequence | MPLAGQGMLL TSMDVDPADE ADFNRWYDRE HIAERVAIDG FLEARRYVAH DASPKYLGLY STRTFDVLSS PAYRAALANQ TEWSNRNIAK FQNMIRGVAR ITASRGQGRG AVLGLVRIRP ALGSEATLRA AIAERLDPLP FDGLISMHLL ENDPALSRPL TDPPGVVSPG ALDWFVLIDG TGVDAVRTAT AGFERSIVEN GSAVVSAGIY KLLWDLSKSD LGD
|
| |