| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1885 |
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| Symbol | |
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| ID | 3908080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2156642 |
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| End bp | 2158615 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883779 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_485504 |
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| Protein GI | 86749008 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAT TGACCAAAGC TGCAGAACTC GGAATTCAAA CCGAATTCTT CGATGGGCAG
GGGCAGCGCC ACGTCACTCC GCCCGACGCC CTCAAGATCG TTCTCGATGC GATGCCGGTG
CGGTCGACGC ATCGATTGCT CGACCGGATC GCCGTTGTTC GGGCCGGGGA AGAGGCTGCT
GCAGATCTGA GCGATGCAGC GGTCTTGCCG GTGGCGTGGA AAATTGTCGC AGGCGACGCC
TGCGTGGCGG AAGGGACGAC CCAGCAGCGC CGCGTCACCT GGCCGTCGCA TTTGCCGGTC
GGCAGCTATC GTCTGCATCT TTCAGACGCG GGCGGTCACA CTGAGGAGGC GCCGCTCCTG
GTGACGCCGC CCACCGCCTT TCGCGGCGAG TTCGATCGCT CCTGGATCAT CGCGGTGCAA
CTCTACGGAC TGCGCTCCGC GCGCAATTGG GGCATCGGCG ACTTCACCGA TCTGGCGCGA
TTGATCGAGA TTGCGGCCGG ATGGGGCGCA GGCGGCATCG GCCTCAATCC GTTGCATGCG
CTGTTCGACG ATCGGCCGGG CGACTGCAGT CCGTATTCGC CCAACAGCCG CATGTTTCTC
AACCCGCTGT ATATCGATGT CGAGCGACTG CCCGAATTCA AACTCGCCGA TCTGCCGGGC
GCCGCGGACG CGCTCGCGCC GCTGCGCGAC GCGGAACTGA TCGACTATCC GAAATCGGCC
GATCTCAAAT GGCGTGCGCT ACGGATGGCT CACGCGGCGT TTCGCGCCGC GCCGGCGCCG
GATCGACGCG CCGCGTTCGA GGCCTTTCGC CGCGAGCGCG CTCCGCTGCT GACCCGGTTC
GCCTGCTTCG AGGCGCTGAG GCATCGGTTC GCCAAGCCGT GGTGGGAATG GCCGGATGAA
TGGCAGCATC CCGACGATGT CCGTTGCGCC CGCTTGCGTG ACGGTGCCGA CGGCGCCGAG
ATCGAATTCA TCGAATACGT CCAATGGTGC GCCGACGATC AGTTGCGCGC CTGCCACGAC
CTCGCTGCCG CGCGCGGCAT GGATGTCGGG CTTTATCTCG ACGTTGCGGT CGGCGTGCAG
AGCGACGGCT TCGACGCCTG GAACGAGCAG GTCGCGATCT CCCGGCATCT GTCGGTCGGC
GCGCCGCCGG ACCAGTTGAA CTCGGCCGGG CAAAACTGGG GCCTCGCGGG CTTCAACGCC
GCGGGGCTCG AACTCACCGG CTTTGCGTCG TTCCGCGAGA TGCTGCGCGC CTCGATGCGC
TATGCCGGCG CGATCCGGCT CGATCATGTT CTCGGCTTGA ACCGGCTGTA TCTGGTGCCG
CACGGCTACG CCGCCGACAG CGGCGTGTAT GTGCAGATGC CGTTCGAAGC GCTGCTGGCG
GTCACCGCGC AGGAGAGTGT CGCCAATCGC TGCGTGGTGA TCGGCGAGGA TCTCGGCACG
GTGCCGGAAG GCTTCCGCGA GCGCCTGGCG GCGTGGGGCG TGTGGTCGTA TCGCGTGATG
ATGTTCGAGC GCGACTTCCA TCAGGGGTGG TTCTTCGGCG TCGATCATTA TCTGCCGGAG
GCGCTGGTGA CCTTCAACAC CCACGACCTC GCGACCTATT CGGGCTGGCG CGCCTCGACA
GACCTGCAGT TCAAGCATTC GGTGGGGATC GATCCCGGCG AGAGCGACGA TGCCAGGCGA
TACGCCTTCG CGATGCTCGG CGACGTGCTG CGGCAGCAGG GCATCGAACA GGAGGATATC
TATGCGGTGC TCACCTTCCT GGCGCGAACC CGGTCGCGAC TGCTGGCGAT CTCGCTCGAA
GATCTGCTCG GCGTGATCGA TCAGCCCAAC GTGCCCGGCA CCGTGTTCCA GCATCCGAAC
TGGCGCCGTC GCCTGCCGCG CGCGCTGGAC GAGATCGCGT CGGCGATCAA TCAGCAGGCG
CTGTCCGCCG CGACGCGGGA GCGCCGGTCC GCGGTGACAT CCGTTGCCGG GTAG
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| Protein sequence | MDLLTKAAEL GIQTEFFDGQ GQRHVTPPDA LKIVLDAMPV RSTHRLLDRI AVVRAGEEAA
ADLSDAAVLP VAWKIVAGDA CVAEGTTQQR RVTWPSHLPV GSYRLHLSDA GGHTEEAPLL
VTPPTAFRGE FDRSWIIAVQ LYGLRSARNW GIGDFTDLAR LIEIAAGWGA GGIGLNPLHA
LFDDRPGDCS PYSPNSRMFL NPLYIDVERL PEFKLADLPG AADALAPLRD AELIDYPKSA
DLKWRALRMA HAAFRAAPAP DRRAAFEAFR RERAPLLTRF ACFEALRHRF AKPWWEWPDE
WQHPDDVRCA RLRDGADGAE IEFIEYVQWC ADDQLRACHD LAAARGMDVG LYLDVAVGVQ
SDGFDAWNEQ VAISRHLSVG APPDQLNSAG QNWGLAGFNA AGLELTGFAS FREMLRASMR
YAGAIRLDHV LGLNRLYLVP HGYAADSGVY VQMPFEALLA VTAQESVANR CVVIGEDLGT
VPEGFRERLA AWGVWSYRVM MFERDFHQGW FFGVDHYLPE ALVTFNTHDL ATYSGWRAST
DLQFKHSVGI DPGESDDARR YAFAMLGDVL RQQGIEQEDI YAVLTFLART RSRLLAISLE
DLLGVIDQPN VPGTVFQHPN WRRRLPRALD EIASAINQQA LSAATRERRS AVTSVAG
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