| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1870 |
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| Symbol | |
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| ID | 3908065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2133845 |
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| End bp | 2134801 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883764 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_485489 |
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| Protein GI | 86748993 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.224001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC GTCTCGCCCG GTTTCGCGGC CGGCTCGAGC TTCCGTTGAT CGCGGCGCCG
ATGTTTCTGG TATCCGGCGT CGATCTGGTC GCCTCCGCAT GTAGCAACGG CGTGATCGGA
TCATTTCCGA CGGTGAATTG CCGTAATACG GAACAACTCG AAAGCTGGAT CGGCACGATC
GCGCAGCGGT TGGCGGACCA CGAGCAACGG AGCGGCCGTC GCGCGGCGCC GTGGTGCCCG
AACCTGATCG TGCATCGCTC CAATGCGCGG CTCGCCGACG ACCTCGCGGT GCTGCTGATG
CACAGGCCCG AGATGGTGAT CACCAGCGTC GGCTCGCCGG AGGCCGTGAT CCAGCCGCTG
CACGATGTCG GCGCGATGGT GCTGGCGGAC GTCGCCAGCA TTCGCCACGC GGAACGCGCG
GCGGCGGCGG GCGCCGACGG GCTGGTGCTG CTGACCGCCG GCGCCGGCGG GCAGACCGGC
TGGCTCAATC CGTTCGCGTT CGTCCGTGCC GTGCGTCGGT TCTTCGACGG CGTGATCGTG
CTGGCCGGCG GAATCGGCGA CGGCGTCGCG CTGCGTGCGG CGATGACGCT CGGCTGCGAT
CTCGGCTACA TGGGCACCAA GTTTATTGCG ACGCAAGAGA GCGCCGCCGA CCCACGCAAC
AAGGCGATGC TGGTCGAGTC CTCTGCCGAC GATATCCTGC TGACGACGGC GTTCACCGGC
CTGCAGACCA ACATGCTGCG GCCGTCGATC GTGGCTGCCG GACTCGACCC GGACGATCTG
CCGGTACGCG GCGCGATCGA CATCGGCAAG GACATCGACG TCGGCGCGCG CGAGAACCGG
CCGCAACGCT GGCGCGATAT CTGGAGCGCG GGACATTCGA CCTCGGGCGT CGGCGGCATC
GTGCCGGTCG CGGAGCTGGT CTCGCAAACC GCGCAGGAAT TCCGCACTGC AGGATGA
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| Protein sequence | MSDRLARFRG RLELPLIAAP MFLVSGVDLV ASACSNGVIG SFPTVNCRNT EQLESWIGTI
AQRLADHEQR SGRRAAPWCP NLIVHRSNAR LADDLAVLLM HRPEMVITSV GSPEAVIQPL
HDVGAMVLAD VASIRHAERA AAAGADGLVL LTAGAGGQTG WLNPFAFVRA VRRFFDGVIV
LAGGIGDGVA LRAAMTLGCD LGYMGTKFIA TQESAADPRN KAMLVESSAD DILLTTAFTG
LQTNMLRPSI VAAGLDPDDL PVRGAIDIGK DIDVGARENR PQRWRDIWSA GHSTSGVGGI
VPVAELVSQT AQEFRTAG
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