| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1778 |
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| Symbol | |
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| ID | 3908859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2039454 |
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| End bp | 2040263 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637883672 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_485397 |
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| Protein GI | 86748901 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.822909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.123613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAAAG TTGCCATGCG CCAGCTGTCT TGTCTCGCCC GGTTTCTCGC CTCCGCGGCC
GTGACCGTGG CGATGGCGAC GGCGCTCGCC GGCTGCCAGA CCGCCGGCAT GTCCGGCATC
ACCGGCTCGC TCGGCGCCCG CGCCGAGGCA CCGGCCGATC CCGGCCGCGC CGCCGAGATC
GCGGGCGAGC GCTACCGGTC CAATCCGAAG GATCCCGGCG CGGCGCTTGC CTATGGCCAG
GCCTTGCGCG CGATCGGTCA GCGCGCCCAG GCGGTGGCGA TGCTGGAGAA GGCGACGCTC
GCCAATCCCG GCAACAAGGC GGTGCTCGCC GGCTATGGCC GCGCGCTCGC CGACAACGGC
AATTTCAGCG CAGCGTTCGA GGCGCTGTCG AACGCGCACA GCCCGGACAA TCCGGATTGG
CGGATCCTGT CGGTGCAGGG CGCCGTGCTC GATCAGATGG GCCGCAGCGA CGAGGCGCGG
CGCTATTACG CCAGCGCGCT CCGGCTCGCG CCCGGCGAGC CGTCGGTGCT GTCCAATCTC
GGCCTGTCCT ACATGTTGAC CAAGGACCTG CCGAAAGCGG AGGCGACGCT GCGCCAGGCC
TATGCCAGCG GCCGGGCCGA TGCGCGGGTG CGACAGAATC TGGCGCTCGT CGTCGGGTTG
CAGGGCCGCT TCGCCGAAGC CGAAGGAATC GTGCGATCCG ATCTGCCGCC CGACGAGGCC
GCCGCCAACG TCGCTTATCT GAAGCAGATG CTGGACGGCA AGGGCGACCC GCGCGGCCGC
GGCCGCGGCG TGCTGGCCTC CGGCGACTGA
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| Protein sequence | MSKVAMRQLS CLARFLASAA VTVAMATALA GCQTAGMSGI TGSLGARAEA PADPGRAAEI
AGERYRSNPK DPGAALAYGQ ALRAIGQRAQ AVAMLEKATL ANPGNKAVLA GYGRALADNG
NFSAAFEALS NAHSPDNPDW RILSVQGAVL DQMGRSDEAR RYYASALRLA PGEPSVLSNL
GLSYMLTKDL PKAEATLRQA YASGRADARV RQNLALVVGL QGRFAEAEGI VRSDLPPDEA
AANVAYLKQM LDGKGDPRGR GRGVLASGD
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