| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1771 |
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| Symbol | |
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| ID | 3909758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2030473 |
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| End bp | 2032350 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883665 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_485390 |
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| Protein GI | 86748894 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.235807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0344403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGC TCAACCGCCG CGAAGTTCTC GTCCTCGGCG TCGGCGCCCT GGCGGCGGCC
CGGATCAGCC CCGCATCCGC GGCCGACGGC GAGACCACAG CCCACGGCAT GTCGGCGTTC
GGCGACCTGA AATACAAGGC GGACTTTCCG CATTTCGACT ACGTCGATCC GCAGGCCCCC
AAAGGCGGGC TGTTCTCGAC CATCCCGTCC AGCCGCGCCT TCAATCAATC GTTCCAGACC
TTCAACTCGC TCAACGCCTA CATCCTCAAG GGCGACGGCG CGCAGGGCAT GGGTCTCACC
TTCGCGTCCT TGATGGCCCG GGCCGGCGAC GAGCCCGACG CGATGTACGG CCTCGCGGCC
GCGAGGGTCG CGATCTCCGC CGACGGGTTG AGCTATCGCT TCACCATGCG TCCAGAGGCG
CGCTTCCACG ACGGCAGCAA GCTCACCGCG CGCGACGCGG CGTTCTCGCT GAACATCCTC
AAGGCCAAGG GGCATCCGCT TATCACCCAG CAGATGCGCG ATTTCATCGA GGCGAAGGCA
GTCGACGATT CGACGCTGTT GGTGACGTTC AAGCCGAAGC GCGGCCGCGA CGTGCCGCTG
TTCGTGGCCG CGCTGCCGTT GTTCTCCGAG GCGTACTACG CCAAGCGGCC GTTCGACGAA
TCGACCATGG AGATCCCGCT CGGCAGCGGG CCCTACAAGG TCGGCCCTTT CGAATCCGGC
CGCTTCATCG CTTTCGAGCG CGTCAAGGAC TGGTGGGGCG CGGCGCTGCC GGTCAATGTC
GGGGCGTTTA ATTTCGACAC CGTCCGGTTC GAGTTCTATC GCGATCGCGA CGTCGCCTTC
GAGGGCTTCA CCGGCCGCAA CTATCTGTAT CGCGAGGAAT TCACCTCGCG GATCTGGAAC
ACGCGCTACG ACTTTCCGGC GATCCATGAG GGCCGGGTCA AGCGCGAGAC GCTGCCCGAC
GAGACGCCGT CCGGCGCGCA GGGCTGGTTC ATCAACACGC GGCGCGACAA GTTCAAGGAT
CCGCGGGTGC GCGAGGCGCT GGGCTGCGCG TTCGACTTCG AATGGACCAA CAAGACCATC
ATGTACGGCG CCTATGCGCG CACGGTGTCG CCGTTCCAGA ATTCCGACAT GATGGCGGTC
GGGCCGCCGT CGGCCGACGA ACTGGCGCTG CTCGAGCCGT TCCGCGGCAA GGTGCCCGAC
GAGGTGTTCG GCGCGCCGTT CGTGCCGCCG GCCTCCGACG GCTCGGGGCA GGACCGCGCG
CTGCTGCGCC GCGGCGGTCA GTTGCTGACA GAGGCCGGAT TCGTCGTCAA GGACCGCAAG
CGCCTGATGC CGAACGGCGA GCCGATGCGC GTCGAGTTTC TGCTCGACGA GCCGGCGTTC
CAGGCCCACC ACATGCCGTT CGTCAAGAAC CTCGCCACGC TCGGCATCGA GGCGACGGTG
CGGCTGGTCG ACCCGGTTCA GTCGCGGGCG CGCCGCGACG ATTTCGACTT CGACATGGCG
ATCGAGCGTT TCAGCTTTTC GACCGTGCCG GGCGAGGCAC TGCGCAATTT CTTCTCGTCG
CAATCGGCCG CCATCAAGGG CTCGAACAAT CTCGCCGGCA TCGCCGATCC GGCGATCGAC
GCGATGATCG ATCGGGTGAT CGCCGCCGAC AGCCGTGCCG ACCTCGTCGT CGCCGCGCGC
GCGCTCGACC GGCTCGTGCG CGCCGGCCGC TATTGGGTGC CGCAGTGGTT TTCGTCGTCG
CATCGGCTGG CCTATTGGGA CGTGTTCGGC CATCCGCCGA ACCTGCCGAA ATACACCGGC
GTCAGCGCCC CGGACCTGTG GTGGGCGAAA AGCAATCCCG CCGCCGAGCG AAGCGACCCG
AAGGGCGAGG GGAAGTAG
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| Protein sequence | MAQLNRREVL VLGVGALAAA RISPASAADG ETTAHGMSAF GDLKYKADFP HFDYVDPQAP
KGGLFSTIPS SRAFNQSFQT FNSLNAYILK GDGAQGMGLT FASLMARAGD EPDAMYGLAA
ARVAISADGL SYRFTMRPEA RFHDGSKLTA RDAAFSLNIL KAKGHPLITQ QMRDFIEAKA
VDDSTLLVTF KPKRGRDVPL FVAALPLFSE AYYAKRPFDE STMEIPLGSG PYKVGPFESG
RFIAFERVKD WWGAALPVNV GAFNFDTVRF EFYRDRDVAF EGFTGRNYLY REEFTSRIWN
TRYDFPAIHE GRVKRETLPD ETPSGAQGWF INTRRDKFKD PRVREALGCA FDFEWTNKTI
MYGAYARTVS PFQNSDMMAV GPPSADELAL LEPFRGKVPD EVFGAPFVPP ASDGSGQDRA
LLRRGGQLLT EAGFVVKDRK RLMPNGEPMR VEFLLDEPAF QAHHMPFVKN LATLGIEATV
RLVDPVQSRA RRDDFDFDMA IERFSFSTVP GEALRNFFSS QSAAIKGSNN LAGIADPAID
AMIDRVIAAD SRADLVVAAR ALDRLVRAGR YWVPQWFSSS HRLAYWDVFG HPPNLPKYTG
VSAPDLWWAK SNPAAERSDP KGEGK
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