| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1756 |
|---|
| Symbol | |
|---|
| ID | 3909743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2010261 |
|---|
| End bp | 2010680 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637883650 |
|---|
| Product | globin |
|---|
| Protein accession | YP_485375 |
|---|
| Protein GI | 86748879 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1017] Hemoglobin-like flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.407573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0115356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG CACAGATCGC CCTGGTTCAG CAGAGCTTCG CCAAGGTCGC ACCGATTTCC
GAACAGGCGG CGAGCCTGTT CTATGGCCGG CTGTTCGAGA TCGCGCCCGA GGTGCAGCCG
CTGTTCGCCA AGGCGGACAT CCGCGACCAG GGTAAGAAGC TGATGGGCAC GCTCGCGGTG
GTGGTCGGCG GGCTGACCGA TCTGCCGGCG ATCCTGCCGG CGGCGAGCCG GCTCGCCAAA
CTGCATGTCA GTTACGGCGT GCAGCCCACG CACTACGCGC CGGTCGGCGC CGCGCTGCTG
TGGACGCTCG AACAGGGGCT GGGCGGAGCC TGGACGCCCG ACCTCGCCGA GGCGTGGACC
GCGGCCTACG CAACGCTGTC GAACTACATG ATCGCGGAAG CCTATGGCGT GGCGGCGTGA
|
|---|
| Protein sequence | MTPAQIALVQ QSFAKVAPIS EQAASLFYGR LFEIAPEVQP LFAKADIRDQ GKKLMGTLAV
VVGGLTDLPA ILPAASRLAK LHVSYGVQPT HYAPVGAALL WTLEQGLGGA WTPDLAEAWT
AAYATLSNYM IAEAYGVAA
|
|---|
| |