Gene RPB_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1736 
Symbol 
ID3909723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1982766 
End bp1983758 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content67% 
IMG OID637883630 
ProductMg2+ transporter protein, CorA-like 
Protein accessionYP_485355 
Protein GI86748859 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0741818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG CCCCTCGCTG CGATCCCGCG ATCCCCGGAC TGGTCTGGGG ATTCAGCTTC 
GGTCCTGACG GAACCCCGCA ATCGCTGCCG GACGACGCAC CGCTCGGCTT CGAGCGCCAC
GGTCGTTACT GGCTGCATTT CAACCTCGCC GATTCCCGTG CGCACCAATC GCTCGCCGAA
ATCGAGCTGC CCGCGCCGGT GCGGACGCTG CTGCAATCCA GGGACACCTA TCAGCAGATG
CACAGCCTCG ACGGCTGCGT CTACGGCGTG ATCGCCGATC TGATGCGCGA CATCGCCGAC
GTCACCGAGG ACACCGGCTT CCTGCGCTTC GTGATGACCG AGCAGCTGCT GATTACGGCC
CGCTATCAGG CTCTGTGCGC GGTCGACACC GCCCGGCGTG CGCTCGAACG CGGGCATCGG
GTCGAAAGCT GTGCGGCGCT GTTCGAAATG ATCGTCCACA ACGTCGCCGA CGCGATGGAG
AAGATCGCCG ACGACGTCTT CGAGACCCTC GACAAGATCG AGGAGAAGCT GCTGTCGGAC
GACACCGACG ATTTGCGCCA GGGGCTCGGG CGGGTGCGGC GGACCTGCGT CCGGCTGCAC
CGCCACCTGT CCGGCCTGCG CATCGTGCTG CACCGATTCG ACCGCAACGA CAGCGCCGAC
CTCGCGCCGG CGCTGCGGCC GCGCGCCGGC AAGCTGGCGC AACGGCTCGA CGGGCTCGAC
CATTCGGTGG TCGAGATGCG CGAGCGCAGC CGGCTGCTGC AGGAGGAGCT GCATCTGAAG
ATCGAGGAAC AGGGCAATGG CAACCTGCGG GTGCTGTCGA TGCTCACCGC GCTGCTGATG
CCGCCGACGC TGGTCAGCGG CATGTTCGGC ATGAACCTGC GCGGGCTGCC GTTCGCCGAA
GGCGACGGCG GGTTCGTCCT GGCGTTGCTG GCGATGGCGA TGTCGTCGTT CGGGGCCTGG
CTGTTGATGA AGCGTATCGG CCTGATCAGG TAG
 
Protein sequence
MTDAPRCDPA IPGLVWGFSF GPDGTPQSLP DDAPLGFERH GRYWLHFNLA DSRAHQSLAE 
IELPAPVRTL LQSRDTYQQM HSLDGCVYGV IADLMRDIAD VTEDTGFLRF VMTEQLLITA
RYQALCAVDT ARRALERGHR VESCAALFEM IVHNVADAME KIADDVFETL DKIEEKLLSD
DTDDLRQGLG RVRRTCVRLH RHLSGLRIVL HRFDRNDSAD LAPALRPRAG KLAQRLDGLD
HSVVEMRERS RLLQEELHLK IEEQGNGNLR VLSMLTALLM PPTLVSGMFG MNLRGLPFAE
GDGGFVLALL AMAMSSFGAW LLMKRIGLIR